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NMRK1 (nicotinamide riboside kinase 1)

Identity

Alias_namesC9orf95
chromosome 9 open reading frame 95
Alias_symbol (synonym)FLJ20559
NRK1
bA235O14.2
Other alias
HGNC (Hugo) NMRK1
LocusID (NCBI) 54981
Atlas_Id 70888
Location 9q21.13  [Link to chromosome band 9q21]
Location_base_pair Starts at 75061200 and ends at 75088217 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PCIF1 (20q13.12) / NMRK1 (9q21.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NMRK1   26057
Cards
Entrez_Gene (NCBI)NMRK1  54981  nicotinamide riboside kinase 1
AliasesC9orf95; NRK1; bA235O14.2
GeneCards (Weizmann)NMRK1
Ensembl hg19 (Hinxton)ENSG00000106733 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000106733 [Gene_View]  chr9:75061200-75088217 [Contig_View]  NMRK1 [Vega]
ICGC DataPortalENSG00000106733
TCGA cBioPortalNMRK1
AceView (NCBI)NMRK1
Genatlas (Paris)NMRK1
WikiGenes54981
SOURCE (Princeton)NMRK1
Genetics Home Reference (NIH)NMRK1
Genomic and cartography
GoldenPath hg38 (UCSC)NMRK1  -     chr9:75061200-75088217 -  9q21.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NMRK1  -     9q21.13   [Description]    (hg19-Feb_2009)
EnsemblNMRK1 - 9q21.13 [CytoView hg19]  NMRK1 - 9q21.13 [CytoView hg38]
Mapping of homologs : NCBINMRK1 [Mapview hg19]  NMRK1 [Mapview hg38]
OMIM608704   
Gene and transcription
Genbank (Entrez)AA412267 AK000566 AK023413 AK097144 AL555401
RefSeq transcript (Entrez)NM_001127603 NM_001330678 NM_001330679 NM_017881
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NMRK1
Cluster EST : UnigeneHs.494186 [ NCBI ]
CGAP (NCI)Hs.494186
Alternative Splicing GalleryENSG00000106733
Gene ExpressionNMRK1 [ NCBI-GEO ]   NMRK1 [ EBI - ARRAY_EXPRESS ]   NMRK1 [ SEEK ]   NMRK1 [ MEM ]
Gene Expression Viewer (FireBrowse)NMRK1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54981
GTEX Portal (Tissue expression)NMRK1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NWW6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NWW6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NWW6
Splice isoforms : SwissVarQ9NWW6
PhosPhoSitePlusQ9NWW6
Domains : Interpro (EBI)P-loop_NTPase    Uridine_kinase-like   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NMRK1
DMDM Disease mutations54981
Blocks (Seattle)NMRK1
PDB (SRS)2P0E    2QG6    2QL6    2QSY    2QSZ    2QT0    2QT1   
PDB (PDBSum)2P0E    2QG6    2QL6    2QSY    2QSZ    2QT0    2QT1   
PDB (IMB)2P0E    2QG6    2QL6    2QSY    2QSZ    2QT0    2QT1   
PDB (RSDB)2P0E    2QG6    2QL6    2QSY    2QSZ    2QT0    2QT1   
Structural Biology KnowledgeBase2P0E    2QG6    2QL6    2QSY    2QSZ    2QT0    2QT1   
SCOP (Structural Classification of Proteins)2P0E    2QG6    2QL6    2QSY    2QSZ    2QT0    2QT1   
CATH (Classification of proteins structures)2P0E    2QG6    2QL6    2QSY    2QSZ    2QT0    2QT1   
SuperfamilyQ9NWW6
Human Protein AtlasENSG00000106733
Peptide AtlasQ9NWW6
HPRD09868
IPIIPI00178946   IPI00827731   IPI00642176   IPI00977631   
Protein Interaction databases
DIP (DOE-UCLA)Q9NWW6
IntAct (EBI)Q9NWW6
FunCoupENSG00000106733
BioGRIDNMRK1
STRING (EMBL)NMRK1
ZODIACNMRK1
Ontologies - Pathways
QuickGOQ9NWW6
Ontology : AmiGOprotein binding  ATP binding  cytosol  NAD biosynthetic process  phosphorylation  NAD metabolic process  metal ion binding  ribosylnicotinamide kinase activity  ribosylnicotinate kinase activity  
Ontology : EGO-EBIprotein binding  ATP binding  cytosol  NAD biosynthetic process  phosphorylation  NAD metabolic process  metal ion binding  ribosylnicotinamide kinase activity  ribosylnicotinate kinase activity  
Pathways : KEGGNicotinate and nicotinamide metabolism   
NDEx NetworkNMRK1
Atlas of Cancer Signalling NetworkNMRK1
Wikipedia pathwaysNMRK1
Orthology - Evolution
OrthoDB54981
GeneTree (enSembl)ENSG00000106733
Phylogenetic Trees/Animal Genes : TreeFamNMRK1
HOVERGENQ9NWW6
HOGENOMQ9NWW6
Homologs : HomoloGeneNMRK1
Homology/Alignments : Family Browser (UCSC)NMRK1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNMRK1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NMRK1
dbVarNMRK1
ClinVarNMRK1
1000_GenomesNMRK1 
Exome Variant ServerNMRK1
ExAC (Exome Aggregation Consortium)NMRK1 (select the gene name)
Genetic variants : HAPMAP54981
Genomic Variants (DGV)NMRK1 [DGVbeta]
DECIPHERNMRK1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNMRK1 
Mutations
ICGC Data PortalNMRK1 
TCGA Data PortalNMRK1 
Broad Tumor PortalNMRK1
OASIS PortalNMRK1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNMRK1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNMRK1
BioMutasearch NMRK1
DgiDB (Drug Gene Interaction Database)NMRK1
DoCM (Curated mutations)NMRK1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NMRK1 (select a term)
intoGenNMRK1
Cancer3DNMRK1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608704   
Orphanet
MedgenNMRK1
Genetic Testing Registry NMRK1
NextProtQ9NWW6 [Medical]
TSGene54981
GENETestsNMRK1
Target ValidationNMRK1
Huge Navigator NMRK1 [HugePedia]
snp3D : Map Gene to Disease54981
BioCentury BCIQNMRK1
ClinGenNMRK1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54981
Chemical/Pharm GKB GenePA134946592
Clinical trialNMRK1
Miscellaneous
canSAR (ICR)NMRK1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNMRK1
EVEXNMRK1
GoPubMedNMRK1
iHOPNMRK1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Wed May 31 15:32:49 CEST 2017

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