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NMU (neuromedin U)

Identity

Other alias-
HGNC (Hugo) NMU
LocusID (NCBI) 10874
Atlas_Id 45881
Location 4q12  [Link to chromosome band 4q12]
Location_base_pair Starts at 55595229 and ends at 55636298 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CLOCK (4q12) / NMU (4q12)KIAA1211 (4q12) / NMU (4q12)CLOCK 4q12 / NMU 4q12
KIAA1211 4q12 / NMU 4q12

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NMU   7859
Cards
Entrez_Gene (NCBI)NMU  10874  neuromedin U
Aliases
GeneCards (Weizmann)NMU
Ensembl hg19 (Hinxton)ENSG00000109255 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000109255 [Gene_View]  chr4:55595229-55636298 [Contig_View]  NMU [Vega]
ICGC DataPortalENSG00000109255
TCGA cBioPortalNMU
AceView (NCBI)NMU
Genatlas (Paris)NMU
WikiGenes10874
SOURCE (Princeton)NMU
Genetics Home Reference (NIH)NMU
Genomic and cartography
GoldenPath hg38 (UCSC)NMU  -     chr4:55595229-55636298 -  4q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NMU  -     4q12   [Description]    (hg19-Feb_2009)
EnsemblNMU - 4q12 [CytoView hg19]  NMU - 4q12 [CytoView hg38]
Mapping of homologs : NCBINMU [Mapview hg19]  NMU [Mapview hg38]
OMIM605103   
Gene and transcription
Genbank (Entrez)AJ510133 AJ510134 AJ510135 AM279463 BC012908
RefSeq transcript (Entrez)NM_001292045 NM_001292046 NM_006681
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NMU
Cluster EST : UnigeneHs.418367 [ NCBI ]
CGAP (NCI)Hs.418367
Alternative Splicing GalleryENSG00000109255
Gene ExpressionNMU [ NCBI-GEO ]   NMU [ EBI - ARRAY_EXPRESS ]   NMU [ SEEK ]   NMU [ MEM ]
Gene Expression Viewer (FireBrowse)NMU [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10874
GTEX Portal (Tissue expression)NMU
Protein : pattern, domain, 3D structure
UniProt/SwissProtP48645   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP48645  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP48645
Splice isoforms : SwissVarP48645
PhosPhoSitePlusP48645
Domaine pattern : Prosite (Expaxy)NMU (PS00967)   
Domains : Interpro (EBI)Neuromedin-U_amidation-site    NMU_C   
Domain families : Pfam (Sanger)NMU (PF02070)   
Domain families : Pfam (NCBI)pfam02070   
Domain families : Smart (EMBL)NMU (SM00084)  
Conserved Domain (NCBI)NMU
DMDM Disease mutations10874
Blocks (Seattle)NMU
SuperfamilyP48645
Human Protein AtlasENSG00000109255
Peptide AtlasP48645
HPRD05485
IPIIPI00010721   IPI01014506   IPI00966167   IPI00384430   IPI00963935   
Protein Interaction databases
DIP (DOE-UCLA)P48645
IntAct (EBI)P48645
FunCoupENSG00000109255
BioGRIDNMU
STRING (EMBL)NMU
ZODIACNMU
Ontologies - Pathways
QuickGOP48645
Ontology : AmiGOgastric acid secretion  receptor binding  protein binding  extracellular region  regulation of smooth muscle contraction  signal transduction  G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  digestion  photoperiodism  sensory perception of pain  eating behavior  neuromedin U receptor binding  terminal bouton  positive regulation of smooth muscle contraction  positive regulation of hormone secretion  positive regulation of synaptic transmission  
Ontology : EGO-EBIgastric acid secretion  receptor binding  protein binding  extracellular region  regulation of smooth muscle contraction  signal transduction  G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  digestion  photoperiodism  sensory perception of pain  eating behavior  neuromedin U receptor binding  terminal bouton  positive regulation of smooth muscle contraction  positive regulation of hormone secretion  positive regulation of synaptic transmission  
NDEx NetworkNMU
Atlas of Cancer Signalling NetworkNMU
Wikipedia pathwaysNMU
Orthology - Evolution
OrthoDB10874
GeneTree (enSembl)ENSG00000109255
Phylogenetic Trees/Animal Genes : TreeFamNMU
HOVERGENP48645
HOGENOMP48645
Homologs : HomoloGeneNMU
Homology/Alignments : Family Browser (UCSC)NMU
Gene fusions - Rearrangements
Fusion: TCGACLOCK 4q12 NMU 4q12 LUAD
Fusion: TCGAKIAA1211 4q12 NMU 4q12 GBM
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNMU [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NMU
dbVarNMU
ClinVarNMU
1000_GenomesNMU 
Exome Variant ServerNMU
ExAC (Exome Aggregation Consortium)NMU (select the gene name)
Genetic variants : HAPMAP10874
Genomic Variants (DGV)NMU [DGVbeta]
DECIPHERNMU [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNMU 
Mutations
ICGC Data PortalNMU 
TCGA Data PortalNMU 
Broad Tumor PortalNMU
OASIS PortalNMU [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNMU  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNMU
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NMU
DgiDB (Drug Gene Interaction Database)NMU
DoCM (Curated mutations)NMU (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NMU (select a term)
intoGenNMU
Cancer3DNMU(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605103   
Orphanet
MedgenNMU
Genetic Testing Registry NMU
NextProtP48645 [Medical]
TSGene10874
GENETestsNMU
Target ValidationNMU
Huge Navigator NMU [HugePedia]
snp3D : Map Gene to Disease10874
BioCentury BCIQNMU
ClinGenNMU
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10874
Chemical/Pharm GKB GenePA31663
Clinical trialNMU
Miscellaneous
canSAR (ICR)NMU (select the gene name)
Probes
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNMU
EVEXNMU
GoPubMedNMU
iHOPNMU
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:09:13 CEST 2017

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