NOD1 (nucleotide-binding oligomerization domain containing 1)

Identity

Other names	CARD4
	CLR7.1
	NLRC1
HGNC	NOD1
Location	7p15-p14
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	NOD1   16390
Entrez_Gene	NOD1  10392  nucleotide-binding oligomerization domain containing 1
	Cards
GeneCards	NOD1
Ensembl	NOD1 [Search_View]   ENSG00000106100 [Gene_View]
Genatlas	NOD1
GeneLynx	NOD1
eGenome	NOD1
euGene	10392
	Genomic and cartography
GoldenPath	NOD1  -     chr7:30430668-30484918 -  7p15.1   [Description]    (hg18-March_2006)
Ensembl	NOD1 - 7p15.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	NOD1
	Gene and transcription
Genbank	AA845215 [ ENTREZ ]
Genbank	AF113925 [ ENTREZ ]
Genbank	AF126484 [ ENTREZ ]
Genbank	AK023969 [ ENTREZ ]
Genbank	AY128682 [ ENTREZ ]
RefSeq	NM_006092 [ SRS ]    NM_006092 [ ENTREZ ]
RefSeq	AC_000050 [ SRS ]    AC_000050 [ ENTREZ ]
RefSeq	AC_000068 [ SRS ]    AC_000068 [ ENTREZ ]
RefSeq	AC_000139 [ SRS ]    AC_000139 [ ENTREZ ]
RefSeq	NC_000007 [ SRS ]    NC_000007 [ ENTREZ ]
RefSeq	NT_007819 [ SRS ]    NT_007819 [ ENTREZ ]
RefSeq	NT_079592 [ SRS ]    NT_079592 [ ENTREZ ]
RefSeq	NW_001839003 [ SRS ]    NW_001839003 [ ENTREZ ]
RefSeq	NW_923240 [ SRS ]    NW_923240 [ ENTREZ ]
AceView	NOD1 AceView - NCBI
Unigene	Hs.405153 [ SRS ]    Hs.405153 [ NCBI ]     HS405153 [ spliceNest ]
Fast-db	3462 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q7Z2K1 [ SRS]    Q7Z2K1 [ EXPASY ]     Q7Z2K1 [ INTERPRO ]     Q7Z2K1 [ UNIPROT ]
Prosite	PS50209 CARD [ SRS ]    PS50209 CARD [ Expasy ]
Interpro	IPR001315 CARD [ SRS ]    IPR001315 CARD [ EBI ]
CluSTr	Q7Z2K1
Pfam	PF00619 CARD [ SRS ]    PF00619 CARD [ Sanger ]    pfam00619 [ NCBI-CDD ]
Blocks	Q7Z2K1
HPRD	05815
	Protein Interaction databases
DIP	Q7Z2K1
IntAct	Q7Z2K1
	Polymorphism : SNP, mutations, diseases
OMIM	605980    [ map ]
GENECLINICS	605980
SNP	NOD1 [dbSNP-NCBI]
SNP	NM_006092 [SNP-NCI]
SNP	NOD1 [GeneSNPs - Utah]  NOD1] [HGBASE - SRS]
HAPMAP	NOD1 [HAPMAP]
COSMIC	NOD1 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	NOD1
	General knowledge
Family Browser	NOD1 [UCSC Family Browser]
SOURCE	NM_006092
SMD	Hs.405153
SAGE	Hs.405153
GO	nucleotide binding [Amigo]  nucleotide binding
GO	protein binding [Amigo]  protein binding
GO	ATP binding [Amigo]  ATP binding
GO	intracellular [Amigo]  intracellular
GO	cytoplasm [Amigo]  cytoplasm
GO	inflammatory response [Amigo]  inflammatory response
GO	intracellular signaling cascade [Amigo]  intracellular signaling cascade
GO	caspase activator activity [Amigo]  caspase activator activity
GO	detection of bacterium [Amigo]  detection of bacterium
GO	interleukin-8 biosynthetic process [Amigo]  interleukin-8 biosynthetic process
GO	defense response to bacterium [Amigo]  defense response to bacterium
GO	peptidoglycan binding [Amigo]  peptidoglycan binding
GO	regulation of apoptosis [Amigo]  regulation of apoptosis
GO	positive regulation of I-kappaB kinase/NF-kappaB cascade [Amigo]  positive regulation of I-kappaB kinase/NF-kappaB cascade
GO	protein oligomerization [Amigo]  protein oligomerization
KEGG	Epithelial cell signaling in Helicobacter pylori infection
PubGene	NOD1
TreeFam	NOD1
CTD	10392 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	NOD1 Related clones (RZPD - Berlin)
	PubMed
PubMed	58 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:22:20 2008