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NOL10 (nucleolar protein 10)

Identity

Alias_namesPQBP5
polyglutamine binding protein 5
Alias_symbol (synonym)FLJ14075
Other alias
HGNC (Hugo) NOL10
LocusID (NCBI) 79954
Atlas_Id 70895
Location 2p25.1  [Link to chromosome band 2p25]
Location_base_pair Starts at 10570766 and ends at 10689987 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
NOL10 (2p25.1) / NOL10 (2p25.1)NOL10 (2p25.1) / UTRN (6q24.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NOL10   25862
Cards
Entrez_Gene (NCBI)NOL10  79954  nucleolar protein 10
AliasesPQBP5
GeneCards (Weizmann)NOL10
Ensembl hg19 (Hinxton)ENSG00000115761 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000115761 [Gene_View]  chr2:10570766-10689987 [Contig_View]  NOL10 [Vega]
ICGC DataPortalENSG00000115761
TCGA cBioPortalNOL10
AceView (NCBI)NOL10
Genatlas (Paris)NOL10
WikiGenes79954
SOURCE (Princeton)NOL10
Genetics Home Reference (NIH)NOL10
Genomic and cartography
GoldenPath hg38 (UCSC)NOL10  -     chr2:10570766-10689987 -  2p25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NOL10  -     2p25.1   [Description]    (hg19-Feb_2009)
EnsemblNOL10 - 2p25.1 [CytoView hg19]  NOL10 - 2p25.1 [CytoView hg38]
Mapping of homologs : NCBINOL10 [Mapview hg19]  NOL10 [Mapview hg38]
OMIM616197   
Gene and transcription
Genbank (Entrez)AK024000 AK024137 AK290680 AK297169 AK299617
RefSeq transcript (Entrez)NM_001261392 NM_001261394 NM_024894
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NOL10
Cluster EST : UnigeneHs.222494 [ NCBI ]
CGAP (NCI)Hs.222494
Alternative Splicing GalleryENSG00000115761
Gene ExpressionNOL10 [ NCBI-GEO ]   NOL10 [ EBI - ARRAY_EXPRESS ]   NOL10 [ SEEK ]   NOL10 [ MEM ]
Gene Expression Viewer (FireBrowse)NOL10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79954
GTEX Portal (Tissue expression)NOL10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BSC4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BSC4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BSC4
Splice isoforms : SwissVarQ9BSC4
PhosPhoSitePlusQ9BSC4
Domains : Interpro (EBI)NUC153    WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_dom   
Domain families : Pfam (Sanger)NUC153 (PF08159)   
Domain families : Pfam (NCBI)pfam08159   
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)NOL10
DMDM Disease mutations79954
Blocks (Seattle)NOL10
SuperfamilyQ9BSC4
Human Protein AtlasENSG00000115761
Peptide AtlasQ9BSC4
HPRD07849
IPIIPI00029513   IPI00016494   IPI01011432   IPI00640783   
Protein Interaction databases
DIP (DOE-UCLA)Q9BSC4
IntAct (EBI)Q9BSC4
FunCoupENSG00000115761
BioGRIDNOL10
STRING (EMBL)NOL10
ZODIACNOL10
Ontologies - Pathways
QuickGOQ9BSC4
Ontology : AmiGORNA binding  nucleolus  
Ontology : EGO-EBIRNA binding  nucleolus  
NDEx NetworkNOL10
Atlas of Cancer Signalling NetworkNOL10
Wikipedia pathwaysNOL10
Orthology - Evolution
OrthoDB79954
GeneTree (enSembl)ENSG00000115761
Phylogenetic Trees/Animal Genes : TreeFamNOL10
HOVERGENQ9BSC4
HOGENOMQ9BSC4
Homologs : HomoloGeneNOL10
Homology/Alignments : Family Browser (UCSC)NOL10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNOL10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NOL10
dbVarNOL10
ClinVarNOL10
1000_GenomesNOL10 
Exome Variant ServerNOL10
ExAC (Exome Aggregation Consortium)NOL10 (select the gene name)
Genetic variants : HAPMAP79954
Genomic Variants (DGV)NOL10 [DGVbeta]
DECIPHERNOL10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNOL10 
Mutations
ICGC Data PortalNOL10 
TCGA Data PortalNOL10 
Broad Tumor PortalNOL10
OASIS PortalNOL10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNOL10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNOL10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NOL10
DgiDB (Drug Gene Interaction Database)NOL10
DoCM (Curated mutations)NOL10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NOL10 (select a term)
intoGenNOL10
Cancer3DNOL10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616197   
Orphanet
MedgenNOL10
Genetic Testing Registry NOL10
NextProtQ9BSC4 [Medical]
TSGene79954
GENETestsNOL10
Target ValidationNOL10
Huge Navigator NOL10 [HugePedia]
snp3D : Map Gene to Disease79954
BioCentury BCIQNOL10
ClinGenNOL10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79954
Chemical/Pharm GKB GenePA142671257
Clinical trialNOL10
Miscellaneous
canSAR (ICR)NOL10 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNOL10
EVEXNOL10
GoPubMedNOL10
iHOPNOL10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:32:51 CEST 2017

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