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NOL11 (nucleolar protein 11)

Identity

Alias (NCBI)-
HGNC (Hugo) NOL11
HGNC Alias symbDKFZP586L0724
LocusID (NCBI) 25926
Atlas_Id 70896
Location 17q24.2  [Link to chromosome band 17q24]
Location_base_pair Starts at 67717936 and ends at 67744531 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NOL11 (17q24.2) / CARD11 (7p22.2)NOL11 (17q24.2) / HSF5 (17q22)NOL11 (17q24.2) / RRP9 (3p21.2)
NOL11 (17q24.2) / ZNF510 (9q22.33)NOL11 HSF5NOL11 CARD11

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)NOL11   24557
Cards
Entrez_Gene (NCBI)NOL11    nucleolar protein 11
Aliases
GeneCards (Weizmann)NOL11
Ensembl hg19 (Hinxton)ENSG00000130935 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130935 [Gene_View]  ENSG00000130935 [Sequence]  chr17:67717936-67744531 [Contig_View]  NOL11 [Vega]
ICGC DataPortalENSG00000130935
TCGA cBioPortalNOL11
AceView (NCBI)NOL11
Genatlas (Paris)NOL11
SOURCE (Princeton)NOL11
Genetics Home Reference (NIH)NOL11
Genomic and cartography
GoldenPath hg38 (UCSC)NOL11  -     chr17:67717936-67744531 +  17q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NOL11  -     17q24.2   [Description]    (hg19-Feb_2009)
GoldenPathNOL11 - 17q24.2 [CytoView hg19]  NOL11 - 17q24.2 [CytoView hg38]
ImmunoBaseENSG00000130935
Genome Data Viewer NCBINOL11 [Mapview hg19]  
OMIM615366   
Gene and transcription
Genbank (Entrez)AK023702 AK025390 AK299483 AL110271 AW273123
RefSeq transcript (Entrez)NM_001303272 NM_015462
Consensus coding sequences : CCDS (NCBI)NOL11
Gene ExpressionNOL11 [ NCBI-GEO ]   NOL11 [ EBI - ARRAY_EXPRESS ]   NOL11 [ SEEK ]   NOL11 [ MEM ]
Gene Expression Viewer (FireBrowse)NOL11 [ Firebrowse - Broad ]
GenevisibleExpression of NOL11 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25926
GTEX Portal (Tissue expression)NOL11
Human Protein AtlasENSG00000130935-NOL11 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H8H0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H8H0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H8H0
PhosPhoSitePlusQ9H8H0
Domains : Interpro (EBI)NOL11    NUC205    WD40_repeat_dom_sf   
Domain families : Pfam (Sanger)NUC205 (PF08168)   
Domain families : Pfam (NCBI)pfam08168   
Conserved Domain (NCBI)NOL11
SuperfamilyQ9H8H0
AlphaFold pdb e-kbQ9H8H0   
Human Protein Atlas [tissue]ENSG00000130935-NOL11 [tissue]
HPRD10900
Protein Interaction databases
DIP (DOE-UCLA)Q9H8H0
IntAct (EBI)Q9H8H0
BioGRIDNOL11
STRING (EMBL)NOL11
ZODIACNOL11
Ontologies - Pathways
QuickGOQ9H8H0
Ontology : AmiGORNA binding  protein binding  nucleoplasm  nucleolus  nucleolus  rRNA processing  maturation of SSU-rRNA  maturation of SSU-rRNA  t-UTP complex  positive regulation of transcription of nucleolar large rRNA by RNA polymerase I  
Ontology : EGO-EBIRNA binding  protein binding  nucleoplasm  nucleolus  nucleolus  rRNA processing  maturation of SSU-rRNA  maturation of SSU-rRNA  t-UTP complex  positive regulation of transcription of nucleolar large rRNA by RNA polymerase I  
NDEx NetworkNOL11
Atlas of Cancer Signalling NetworkNOL11
Wikipedia pathwaysNOL11
Orthology - Evolution
OrthoDB25926
GeneTree (enSembl)ENSG00000130935
Phylogenetic Trees/Animal Genes : TreeFamNOL11
Homologs : HomoloGeneNOL11
Homology/Alignments : Family Browser (UCSC)NOL11
Gene fusions - Rearrangements
Fusion : QuiverNOL11
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNOL11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NOL11
dbVarNOL11
ClinVarNOL11
MonarchNOL11
1000_GenomesNOL11 
Exome Variant ServerNOL11
GNOMAD BrowserENSG00000130935
Varsome BrowserNOL11
ACMGNOL11 variants
VarityQ9H8H0
Genomic Variants (DGV)NOL11 [DGVbeta]
DECIPHERNOL11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNOL11 
Mutations
ICGC Data PortalNOL11 
TCGA Data PortalNOL11 
Broad Tumor PortalNOL11
OASIS PortalNOL11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNOL11  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DNOL11
Mutations and Diseases : HGMDNOL11
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaNOL11
DgiDB (Drug Gene Interaction Database)NOL11
DoCM (Curated mutations)NOL11
CIViC (Clinical Interpretations of Variants in Cancer)NOL11
Cancer3DNOL11
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615366   
Orphanet
DisGeNETNOL11
MedgenNOL11
Genetic Testing Registry NOL11
NextProtQ9H8H0 [Medical]
GENETestsNOL11
Target ValidationNOL11
Huge Navigator NOL11 [HugePedia]
ClinGenNOL11
Clinical trials, drugs, therapy
MyCancerGenomeNOL11
Protein Interactions : CTDNOL11
Pharm GKB GenePA142671258
PharosQ9H8H0
Clinical trialNOL11
Miscellaneous
canSAR (ICR)NOL11
HarmonizomeNOL11
DataMed IndexNOL11
Probes
Litterature
PubMed49 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNOL11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:12:53 CEST 2021

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