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NOMO3 (NODAL modulator 3)

Identity

Other aliasNomo
HGNC (Hugo) NOMO3
LocusID (NCBI) 408050
Atlas_Id 70903
Location 16p13.11  [Link to chromosome band 16p13]
Location_base_pair Starts at 16232532 and ends at 16294811 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NOMO3   25242
Cards
Entrez_Gene (NCBI)NOMO3  408050  NODAL modulator 3
AliasesNomo
GeneCards (Weizmann)NOMO3
Ensembl hg19 (Hinxton)ENSG00000103226 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000103226 [Gene_View]  chr16:16232532-16294811 [Contig_View]  NOMO3 [Vega]
ICGC DataPortalENSG00000103226
TCGA cBioPortalNOMO3
AceView (NCBI)NOMO3
Genatlas (Paris)NOMO3
WikiGenes408050
SOURCE (Princeton)NOMO3
Genetics Home Reference (NIH)NOMO3
Genomic and cartography
GoldenPath hg38 (UCSC)NOMO3  -     chr16:16232532-16294811 +  16p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NOMO3  -     16p13.11   [Description]    (hg19-Feb_2009)
EnsemblNOMO3 - 16p13.11 [CytoView hg19]  NOMO3 - 16p13.11 [CytoView hg38]
Mapping of homologs : NCBINOMO3 [Mapview hg19]  NOMO3 [Mapview hg38]
OMIM609159   
Gene and transcription
Genbank (Entrez)AI752685 AU132793 AW503115 BC006531 BC013837
RefSeq transcript (Entrez)NM_001004067
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_187607
Consensus coding sequences : CCDS (NCBI)NOMO3
Cluster EST : UnigeneHs.460141 [ NCBI ]
CGAP (NCI)Hs.460141
Alternative Splicing GalleryENSG00000103226
Gene ExpressionNOMO3 [ NCBI-GEO ]   NOMO3 [ EBI - ARRAY_EXPRESS ]   NOMO3 [ SEEK ]   NOMO3 [ MEM ]
Gene Expression Viewer (FireBrowse)NOMO3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)408050
GTEX Portal (Tissue expression)NOMO3
Protein : pattern, domain, 3D structure
UniProt/SwissProtP69849   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP69849  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP69849
Splice isoforms : SwissVarP69849
PhosPhoSitePlusP69849
Domains : Interpro (EBI)Carb-bd-like_fold    CarboxyPept-like_regulatory    CarboxyPept_regulatory_dom    Ig-like_fold   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NOMO3
DMDM Disease mutations408050
Blocks (Seattle)NOMO3
SuperfamilyP69849
Human Protein AtlasENSG00000103226
Peptide AtlasP69849
HPRD12376
IPIIPI00872411   IPI00329352   IPI01009730   IPI01012164   IPI00413732   IPI00941810   
Protein Interaction databases
DIP (DOE-UCLA)P69849
IntAct (EBI)P69849
FunCoupENSG00000103226
BioGRIDNOMO3
STRING (EMBL)NOMO3
ZODIACNOMO3
Ontologies - Pathways
QuickGOP69849
Ontology : AmiGOmolecular_function  cellular_component  biological_process  integral component of membrane  carbohydrate binding  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  integral component of membrane  carbohydrate binding  
NDEx NetworkNOMO3
Atlas of Cancer Signalling NetworkNOMO3
Wikipedia pathwaysNOMO3
Orthology - Evolution
OrthoDB408050
GeneTree (enSembl)ENSG00000103226
Phylogenetic Trees/Animal Genes : TreeFamNOMO3
HOVERGENP69849
HOGENOMP69849
Homologs : HomoloGeneNOMO3
Homology/Alignments : Family Browser (UCSC)NOMO3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNOMO3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NOMO3
dbVarNOMO3
ClinVarNOMO3
1000_GenomesNOMO3 
Exome Variant ServerNOMO3
ExAC (Exome Aggregation Consortium)NOMO3 (select the gene name)
Genetic variants : HAPMAP408050
Genomic Variants (DGV)NOMO3 [DGVbeta]
DECIPHERNOMO3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNOMO3 
Mutations
ICGC Data PortalNOMO3 
TCGA Data PortalNOMO3 
Broad Tumor PortalNOMO3
OASIS PortalNOMO3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNOMO3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNOMO3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NOMO3
DgiDB (Drug Gene Interaction Database)NOMO3
DoCM (Curated mutations)NOMO3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NOMO3 (select a term)
intoGenNOMO3
Cancer3DNOMO3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609159   
Orphanet
MedgenNOMO3
Genetic Testing Registry NOMO3
NextProtP69849 [Medical]
TSGene408050
GENETestsNOMO3
Target ValidationNOMO3
Huge Navigator NOMO3 [HugePedia]
snp3D : Map Gene to Disease408050
BioCentury BCIQNOMO3
ClinGenNOMO3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD408050
Chemical/Pharm GKB GenePA134950400
Clinical trialNOMO3
Miscellaneous
canSAR (ICR)NOMO3 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNOMO3
EVEXNOMO3
GoPubMedNOMO3
iHOPNOMO3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:10 CEST 2017

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