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NOSIP (nitric oxide synthase interacting protein)

Identity

Alias (NCBI)CGI-25
HGNC (Hugo) NOSIP
HGNC Alias symbCGI-25
LocusID (NCBI) 51070
Atlas_Id 70909
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 49555468 and ends at 49580572 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 2 ]
  t(19;19)(p13;q13) NOSIP/STK11
t(19;19)(p13;q13) STK11/NOSIP


External links

Nomenclature
HGNC (Hugo)NOSIP   17946
Cards
Entrez_Gene (NCBI)NOSIP    nitric oxide synthase interacting protein
AliasesCGI-25
GeneCards (Weizmann)NOSIP
Ensembl hg19 (Hinxton)ENSG00000142546 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000142546 [Gene_View]  ENSG00000142546 [Sequence]  chr19:49555468-49580572 [Contig_View]  NOSIP [Vega]
ICGC DataPortalENSG00000142546
TCGA cBioPortalNOSIP
AceView (NCBI)NOSIP
Genatlas (Paris)NOSIP
SOURCE (Princeton)NOSIP
Genetics Home Reference (NIH)NOSIP
Genomic and cartography
GoldenPath hg38 (UCSC)NOSIP  -     chr19:49555468-49580572 -  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NOSIP  -     19q13.33   [Description]    (hg19-Feb_2009)
GoldenPathNOSIP - 19q13.33 [CytoView hg19]  NOSIP - 19q13.33 [CytoView hg38]
ImmunoBaseENSG00000142546
genome Data Viewer NCBINOSIP [Mapview hg19]  
OMIM616759   
Gene and transcription
Genbank (Entrez)AF132959 AI311486 AK092444 AK291535 AK300720
RefSeq transcript (Entrez)NM_001270960 NM_001363649 NM_015953
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NOSIP
Alternative Splicing GalleryENSG00000142546
Gene ExpressionNOSIP [ NCBI-GEO ]   NOSIP [ EBI - ARRAY_EXPRESS ]   NOSIP [ SEEK ]   NOSIP [ MEM ]
Gene Expression Viewer (FireBrowse)NOSIP [ Firebrowse - Broad ]
GenevisibleExpression of NOSIP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51070
GTEX Portal (Tissue expression)NOSIP
Human Protein AtlasENSG00000142546-NOSIP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y314   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y314  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y314
Splice isoforms : SwissVarQ9Y314
Catalytic activity : Enzyme2.3.2.27 [ Enzyme-Expasy ]   2.3.2.272.3.2.27 [ IntEnz-EBI ]   2.3.2.27 [ BRENDA ]   2.3.2.27 [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ9Y314
Domains : Interpro (EBI)NOSIP    Znf-NOSIP    Znf_RING/FYVE/PHD   
Domain families : Pfam (Sanger)zf-NOSIP (PF15906)   
Domain families : Pfam (NCBI)pfam15906   
Conserved Domain (NCBI)NOSIP
Blocks (Seattle)NOSIP
SuperfamilyQ9Y314
Human Protein Atlas [tissue]ENSG00000142546-NOSIP [tissue]
Peptide AtlasQ9Y314
HPRD17642
IPIIPI00006408   IPI00910915   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y314
IntAct (EBI)Q9Y314
BioGRIDNOSIP
STRING (EMBL)NOSIP
ZODIACNOSIP
Ontologies - Pathways
QuickGOQ9Y314
Ontology : AmiGOGolgi membrane  RNA binding  protein binding  nucleus  nucleus  nucleoplasm  cytoplasm  cytosol  multicellular organism development  protein ubiquitination  negative regulation of catalytic activity  regulation of nitric-oxide synthase activity  negative regulation of nitric-oxide synthase activity  ubiquitin protein ligase activity  
Ontology : EGO-EBIGolgi membrane  RNA binding  protein binding  nucleus  nucleus  nucleoplasm  cytoplasm  cytosol  multicellular organism development  protein ubiquitination  negative regulation of catalytic activity  regulation of nitric-oxide synthase activity  negative regulation of nitric-oxide synthase activity  ubiquitin protein ligase activity  
NDEx NetworkNOSIP
Atlas of Cancer Signalling NetworkNOSIP
Wikipedia pathwaysNOSIP
Orthology - Evolution
OrthoDB51070
GeneTree (enSembl)ENSG00000142546
Phylogenetic Trees/Animal Genes : TreeFamNOSIP
HOGENOMQ9Y314
Homologs : HomoloGeneNOSIP
Homology/Alignments : Family Browser (UCSC)NOSIP
Gene fusions - Rearrangements
Fusion : QuiverNOSIP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNOSIP [hg38]
dbVarNOSIP
ClinVarNOSIP
MonarchNOSIP
1000_GenomesNOSIP 
Exome Variant ServerNOSIP
GNOMAD BrowserENSG00000142546
Varsome BrowserNOSIP
Genomic Variants (DGV)NOSIP [DGVbeta]
DECIPHERNOSIP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNOSIP 
Mutations
ICGC Data PortalNOSIP 
TCGA Data PortalNOSIP 
Broad Tumor PortalNOSIP
OASIS PortalNOSIP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNOSIP  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DNOSIP
Mutations and Diseases : HGMDNOSIP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NOSIP
DgiDB (Drug Gene Interaction Database)NOSIP
DoCM (Curated mutations)NOSIP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NOSIP (select a term)
intoGenNOSIP
Cancer3DNOSIP(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616759   
Orphanet
DisGeNETNOSIP
MedgenNOSIP
Genetic Testing Registry NOSIP
NextProtQ9Y314 [Medical]
GENETestsNOSIP
Target ValidationNOSIP
Huge Navigator NOSIP [HugePedia]
ClinGenNOSIP
Clinical trials, drugs, therapy
MyCancerGenomeNOSIP
Protein Interactions : CTD
Pharm GKB GenePA134989259
Clinical trialNOSIP
Miscellaneous
canSAR (ICR)NOSIP (select the gene name)
HarmonizomeNOSIP
DataMed IndexNOSIP
Probes
Litterature
PubMed37 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNOSIP
EVEXNOSIP
GoPubMedNOSIP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:19:17 CET 2020

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