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NOTCH4 (notch receptor 4)

Identity

Alias (NCBI)INT3
HGNC (Hugo) NOTCH4
HGNC Previous nameINT3
HGNC Previous nameNotch (Drosophila) homolog 4
 Notch homolog 4 (Drosophila)
 notch 4
LocusID (NCBI) 4855
Atlas_Id 41558
Location 6p21.32  [Link to chromosome band 6p21]
Location_base_pair Starts at 32194843 and ends at 32224067 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CNNM2 (10q24.32)::NOTCH4 (6p21.32)CNNM2 10q24.32::NOTCH4 6p21.32

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(6;17)(p21;p13)


External links

Nomenclature
HGNC (Hugo)NOTCH4   7884
Cards
Entrez_Gene (NCBI)NOTCH4    notch receptor 4
AliasesINT3
GeneCards (Weizmann)NOTCH4
Ensembl hg19 (Hinxton)ENSG00000204301 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204301 [Gene_View]  ENSG00000204301 [Sequence]  chr6:32194843-32224067 [Contig_View]  NOTCH4 [Vega]
ICGC DataPortalENSG00000204301
TCGA cBioPortalNOTCH4
AceView (NCBI)NOTCH4
Genatlas (Paris)NOTCH4
SOURCE (Princeton)NOTCH4
Genetics Home Reference (NIH)NOTCH4
Genomic and cartography
GoldenPath hg38 (UCSC)NOTCH4  -     chr6:32194843-32224067 -  6p21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NOTCH4  -     6p21.32   [Description]    (hg19-Feb_2009)
GoldenPathNOTCH4 - 6p21.32 [CytoView hg19]  NOTCH4 - 6p21.32 [CytoView hg38]
ImmunoBaseENSG00000204301
Genome Data Viewer NCBINOTCH4 [Mapview hg19]  
OMIM164951   
Gene and transcription
Genbank (Entrez)AK131314 AK290785 AK293692 AK294161 AL705928
RefSeq transcript (Entrez)NM_004557
Consensus coding sequences : CCDS (NCBI)NOTCH4
Gene ExpressionNOTCH4 [ NCBI-GEO ]   NOTCH4 [ EBI - ARRAY_EXPRESS ]   NOTCH4 [ SEEK ]   NOTCH4 [ MEM ]
Gene Expression Viewer (FireBrowse)NOTCH4 [ Firebrowse - Broad ]
GenevisibleExpression of NOTCH4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4855
GTEX Portal (Tissue expression)NOTCH4
Human Protein AtlasENSG00000204301-NOTCH4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NOTCH4
Human Protein Atlas [tissue]ENSG00000204301-NOTCH4 [tissue]
HPRD01290
Protein Interaction databases
BioGRIDNOTCH4
STRING (EMBL)NOTCH4
ZODIACNOTCH4
Ontologies - Pathways
Litterature
PubMed178 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNOTCH4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jan 20 12:49:46 CET 2022

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