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NPB (neuropeptide B)

Identity

Alias_symbol (synonym)PPL7
PPNPB
Other aliasL7
HGNC (Hugo) NPB
LocusID (NCBI) 256933
Atlas_Id 70915
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 81902109 and ends at 81902905 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NPB   30099
Cards
Entrez_Gene (NCBI)NPB  256933  neuropeptide B
AliasesL7; PPL7; PPNPB
GeneCards (Weizmann)NPB
Ensembl hg19 (Hinxton)ENSG00000183979 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183979 [Gene_View]  chr17:81902109-81902905 [Contig_View]  NPB [Vega]
ICGC DataPortalENSG00000183979
TCGA cBioPortalNPB
AceView (NCBI)NPB
Genatlas (Paris)NPB
WikiGenes256933
SOURCE (Princeton)NPB
Genetics Home Reference (NIH)NPB
Genomic and cartography
GoldenPath hg38 (UCSC)NPB  -     chr17:81902109-81902905 +  17q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NPB  -     17q25.3   [Description]    (hg19-Feb_2009)
EnsemblNPB - 17q25.3 [CytoView hg19]  NPB - 17q25.3 [CytoView hg38]
Mapping of homologs : NCBINPB [Mapview hg19]  NPB [Mapview hg38]
OMIM607996   
Gene and transcription
Genbank (Entrez)AB085942 AF525737 AF525738 BC033173 BC126128
RefSeq transcript (Entrez)NM_148896
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NPB
Cluster EST : UnigeneHs.708916 [ NCBI ]
CGAP (NCI)Hs.708916
Alternative Splicing GalleryENSG00000183979
Gene ExpressionNPB [ NCBI-GEO ]   NPB [ EBI - ARRAY_EXPRESS ]   NPB [ SEEK ]   NPB [ MEM ]
Gene Expression Viewer (FireBrowse)NPB [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)256933
GTEX Portal (Tissue expression)NPB
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NG41   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NG41  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NG41
Splice isoforms : SwissVarQ8NG41
PhosPhoSitePlusQ8NG41
Domains : Interpro (EBI)Neuropept_B_pre    Neuropept_BW_pre   
Domain families : Pfam (Sanger)NPBW (PF15180)   
Domain families : Pfam (NCBI)pfam15180   
Domain structure : Prodom (Prabi Lyon)PD685249 (PD685249)   
Conserved Domain (NCBI)NPB
DMDM Disease mutations256933
Blocks (Seattle)NPB
SuperfamilyQ8NG41
Human Protein AtlasENSG00000183979
Peptide AtlasQ8NG41
HPRD16267
IPIIPI00168903   
Protein Interaction databases
DIP (DOE-UCLA)Q8NG41
IntAct (EBI)Q8NG41
FunCoupENSG00000183979
BioGRIDNPB
STRING (EMBL)NPB
ZODIACNPB
Ontologies - Pathways
QuickGOQ8NG41
Ontology : AmiGOG-protein coupled receptor binding  protein binding  extracellular region  G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  
Ontology : EGO-EBIG-protein coupled receptor binding  protein binding  extracellular region  G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  
NDEx NetworkNPB
Atlas of Cancer Signalling NetworkNPB
Wikipedia pathwaysNPB
Orthology - Evolution
OrthoDB256933
GeneTree (enSembl)ENSG00000183979
Phylogenetic Trees/Animal Genes : TreeFamNPB
HOVERGENQ8NG41
HOGENOMQ8NG41
Homologs : HomoloGeneNPB
Homology/Alignments : Family Browser (UCSC)NPB
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNPB [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NPB
dbVarNPB
ClinVarNPB
1000_GenomesNPB 
Exome Variant ServerNPB
ExAC (Exome Aggregation Consortium)NPB (select the gene name)
Genetic variants : HAPMAP256933
Genomic Variants (DGV)NPB [DGVbeta]
DECIPHERNPB [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNPB 
Mutations
ICGC Data PortalNPB 
TCGA Data PortalNPB 
Broad Tumor PortalNPB
OASIS PortalNPB [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNPB  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNPB
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NPB
DgiDB (Drug Gene Interaction Database)NPB
DoCM (Curated mutations)NPB (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NPB (select a term)
intoGenNPB
Cancer3DNPB(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607996   
Orphanet
MedgenNPB
Genetic Testing Registry NPB
NextProtQ8NG41 [Medical]
TSGene256933
GENETestsNPB
Target ValidationNPB
Huge Navigator NPB [HugePedia]
snp3D : Map Gene to Disease256933
BioCentury BCIQNPB
ClinGenNPB
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD256933
Chemical/Pharm GKB GenePA142671255
Clinical trialNPB
Miscellaneous
canSAR (ICR)NPB (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNPB
EVEXNPB
GoPubMedNPB
iHOPNPB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:12 CEST 2017

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