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NPBWR1 (neuropeptides B and W receptor 1)

Identity

Alias_namesGPR7
G protein-coupled receptor 7
Other alias
HGNC (Hugo) NPBWR1
LocusID (NCBI) 2831
Atlas_Id 47657
Location 8q11.23  [Link to chromosome band 8q11]
Location_base_pair Starts at 52939908 and ends at 52940894 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NPBWR1   4522
Cards
Entrez_Gene (NCBI)NPBWR1  2831  neuropeptides B and W receptor 1
AliasesGPR7
GeneCards (Weizmann)NPBWR1
Ensembl hg19 (Hinxton)ENSG00000183729 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183729 [Gene_View]  chr8:52939908-52940894 [Contig_View]  NPBWR1 [Vega]
ICGC DataPortalENSG00000183729
TCGA cBioPortalNPBWR1
AceView (NCBI)NPBWR1
Genatlas (Paris)NPBWR1
WikiGenes2831
SOURCE (Princeton)NPBWR1
Genetics Home Reference (NIH)NPBWR1
Genomic and cartography
GoldenPath hg38 (UCSC)NPBWR1  -     chr8:52939908-52940894 +  8q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NPBWR1  -     8q11.23   [Description]    (hg19-Feb_2009)
EnsemblNPBWR1 - 8q11.23 [CytoView hg19]  NPBWR1 - 8q11.23 [CytoView hg38]
Mapping of homologs : NCBINPBWR1 [Mapview hg19]  NPBWR1 [Mapview hg38]
OMIM600730   
Gene and transcription
Genbank (Entrez)BC069117 BC107101
RefSeq transcript (Entrez)NM_005285
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NPBWR1
Cluster EST : UnigeneHs.248117 [ NCBI ]
CGAP (NCI)Hs.248117
Alternative Splicing GalleryENSG00000183729
Gene ExpressionNPBWR1 [ NCBI-GEO ]   NPBWR1 [ EBI - ARRAY_EXPRESS ]   NPBWR1 [ SEEK ]   NPBWR1 [ MEM ]
Gene Expression Viewer (FireBrowse)NPBWR1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2831
GTEX Portal (Tissue expression)NPBWR1
Human Protein AtlasENSG00000183729-NPBWR1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP48145   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP48145  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP48145
Splice isoforms : SwissVarP48145
PhosPhoSitePlusP48145
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Neuropept_B/W_rcpt    NPBW1   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)NPBWR1
DMDM Disease mutations2831
Blocks (Seattle)NPBWR1
SuperfamilyP48145
Human Protein Atlas [tissue]ENSG00000183729-NPBWR1 [tissue]
Peptide AtlasP48145
HPRD02840
IPIIPI00008160   IPI00748729   
Protein Interaction databases
DIP (DOE-UCLA)P48145
IntAct (EBI)P48145
FunCoupENSG00000183729
BioGRIDNPBWR1
STRING (EMBL)NPBWR1
ZODIACNPBWR1
Ontologies - Pathways
QuickGOP48145
Ontology : AmiGOopioid receptor activity  protein binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger  neuropeptide signaling pathway  chemical synaptic transmission  neuropeptide receptor activity  integral component of membrane  regulation of metabolic process  opioid receptor signaling pathway  neuropeptide binding  neuron projection  
Ontology : EGO-EBIopioid receptor activity  protein binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger  neuropeptide signaling pathway  chemical synaptic transmission  neuropeptide receptor activity  integral component of membrane  regulation of metabolic process  opioid receptor signaling pathway  neuropeptide binding  neuron projection  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkNPBWR1
Atlas of Cancer Signalling NetworkNPBWR1
Wikipedia pathwaysNPBWR1
Orthology - Evolution
OrthoDB2831
GeneTree (enSembl)ENSG00000183729
Phylogenetic Trees/Animal Genes : TreeFamNPBWR1
HOVERGENP48145
HOGENOMP48145
Homologs : HomoloGeneNPBWR1
Homology/Alignments : Family Browser (UCSC)NPBWR1
Gene fusions - Rearrangements
Tumor Fusion PortalNPBWR1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNPBWR1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NPBWR1
dbVarNPBWR1
ClinVarNPBWR1
1000_GenomesNPBWR1 
Exome Variant ServerNPBWR1
ExAC (Exome Aggregation Consortium)ENSG00000183729
GNOMAD BrowserENSG00000183729
Genetic variants : HAPMAP2831
Genomic Variants (DGV)NPBWR1 [DGVbeta]
DECIPHERNPBWR1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNPBWR1 
Mutations
ICGC Data PortalNPBWR1 
TCGA Data PortalNPBWR1 
Broad Tumor PortalNPBWR1
OASIS PortalNPBWR1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNPBWR1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNPBWR1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NPBWR1
DgiDB (Drug Gene Interaction Database)NPBWR1
DoCM (Curated mutations)NPBWR1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NPBWR1 (select a term)
intoGenNPBWR1
Cancer3DNPBWR1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600730   
Orphanet
DisGeNETNPBWR1
MedgenNPBWR1
Genetic Testing Registry NPBWR1
NextProtP48145 [Medical]
TSGene2831
GENETestsNPBWR1
Target ValidationNPBWR1
Huge Navigator NPBWR1 [HugePedia]
snp3D : Map Gene to Disease2831
BioCentury BCIQNPBWR1
ClinGenNPBWR1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2831
Chemical/Pharm GKB GenePA28912
Clinical trialNPBWR1
Miscellaneous
canSAR (ICR)NPBWR1 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNPBWR1
EVEXNPBWR1
GoPubMedNPBWR1
iHOPNPBWR1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:26:35 CET 2017

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