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NPHP3-ACAD11 (NPHP3-ACAD11 readthrough (NMD candidate))

Identity

Other alias-
HGNC (Hugo) NPHP3-ACAD11
LocusID (NCBI) 100532724
Atlas_Id 70925
Location 3q22.1  [Link to chromosome band 3q22]
Location_base_pair Starts at 132558138 and ends at 132722459 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FNIP2 (4q32.1) / NPHP3-ACAD11 (3q22.1)NBPF14 (1q21.2) / NPHP3-ACAD11 (3q22.1)NPHP3-ACAD11 (3q22.1) / GNS (12q14.3)
NPHP3-ACAD11 (3q22.1) / NPHP3-ACAD11 (3q22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NPHP3-ACAD11   48351
Cards
Entrez_Gene (NCBI)NPHP3-ACAD11  100532724  NPHP3-ACAD11 readthrough (NMD candidate)
Aliases
GeneCards (Weizmann)NPHP3-ACAD11
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:132558138-132722459 [Contig_View]  NPHP3-ACAD11 [Vega]
TCGA cBioPortalNPHP3-ACAD11
AceView (NCBI)NPHP3-ACAD11
Genatlas (Paris)NPHP3-ACAD11
WikiGenes100532724
SOURCE (Princeton)NPHP3-ACAD11
Genetics Home Reference (NIH)NPHP3-ACAD11
Genomic and cartography
GoldenPath hg38 (UCSC)NPHP3-ACAD11  -     chr3:132558138-132722459 -  3q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NPHP3-ACAD11  -     3q22.1   [Description]    (hg19-Feb_2009)
EnsemblNPHP3-ACAD11 - 3q22.1 [CytoView hg19]  NPHP3-ACAD11 - 3q22.1 [CytoView hg38]
Mapping of homologs : NCBINPHP3-ACAD11 [Mapview hg19]  NPHP3-ACAD11 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB082531 AY257867
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NPHP3-ACAD11
Cluster EST : UnigeneHs.511991 [ NCBI ]
CGAP (NCI)Hs.511991
Gene ExpressionNPHP3-ACAD11 [ NCBI-GEO ]   NPHP3-ACAD11 [ EBI - ARRAY_EXPRESS ]   NPHP3-ACAD11 [ SEEK ]   NPHP3-ACAD11 [ MEM ]
Gene Expression Viewer (FireBrowse)NPHP3-ACAD11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100532724
GTEX Portal (Tissue expression)NPHP3-ACAD11
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NPHP3-ACAD11
DMDM Disease mutations100532724
Blocks (Seattle)NPHP3-ACAD11
IPIIPI00607578   IPI00337657   IPI00607702   IPI00043491   IPI00385061   IPI00553066   IPI00432737   IPI00871188   IPI00945257   
Protein Interaction databases
BioGRIDNPHP3-ACAD11
STRING (EMBL)NPHP3-ACAD11
ZODIACNPHP3-ACAD11
Ontologies - Pathways
Huge Navigator NPHP3-ACAD11 [HugePedia]
snp3D : Map Gene to Disease100532724
BioCentury BCIQNPHP3-ACAD11
ClinGenNPHP3-ACAD11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100532724
Clinical trialNPHP3-ACAD11
Miscellaneous
canSAR (ICR)NPHP3-ACAD11 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNPHP3-ACAD11
EVEXNPHP3-ACAD11
GoPubMedNPHP3-ACAD11
iHOPNPHP3-ACAD11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:33:50 CEST 2017

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