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NPNT (nephronectin)

Identity

Alias (NCBI)EGFL6L
POEM
HGNC (Hugo) NPNT
HGNC Alias symbEGFL6L
POEM
LocusID (NCBI) 255743
Atlas_Id 50401
Location 4q24  [Link to chromosome band 4q24]
Location_base_pair Starts at 105895471 and ends at 105971671 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LMOD1 (1q32.1) / NPNT (4q24)NPNT (4q24) / NPNT (4q24)NPNT (4q24) / ST3GAL1 (8q24.22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)NPNT   27405
Cards
Entrez_Gene (NCBI)NPNT    nephronectin
AliasesEGFL6L; POEM
GeneCards (Weizmann)NPNT
Ensembl hg19 (Hinxton)ENSG00000168743 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168743 [Gene_View]  ENSG00000168743 [Sequence]  chr4:105895471-105971671 [Contig_View]  NPNT [Vega]
ICGC DataPortalENSG00000168743
TCGA cBioPortalNPNT
AceView (NCBI)NPNT
Genatlas (Paris)NPNT
SOURCE (Princeton)NPNT
Genetics Home Reference (NIH)NPNT
Genomic and cartography
GoldenPath hg38 (UCSC)NPNT  -     chr4:105895471-105971671 +  4q24   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NPNT  -     4q24   [Description]    (hg19-Feb_2009)
GoldenPathNPNT - 4q24 [CytoView hg19]  NPNT - 4q24 [CytoView hg38]
ImmunoBaseENSG00000168743
Genome Data Viewer NCBINPNT [Mapview hg19]  
OMIM610306   
Gene and transcription
Genbank (Entrez)AK172856 AK290029 AK295772 AK302477 AK304279
RefSeq transcript (Entrez)NM_001033047 NM_001184690 NM_001184691 NM_001184692 NM_001184693 NM_198278
Consensus coding sequences : CCDS (NCBI)NPNT
Gene ExpressionNPNT [ NCBI-GEO ]   NPNT [ EBI - ARRAY_EXPRESS ]   NPNT [ SEEK ]   NPNT [ MEM ]
Gene Expression Viewer (FireBrowse)NPNT [ Firebrowse - Broad ]
GenevisibleExpression of NPNT in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)255743
GTEX Portal (Tissue expression)NPNT
Human Protein AtlasENSG00000168743-NPNT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NPNT
Human Protein Atlas [tissue]ENSG00000168743-NPNT [tissue]
HPRD14141
Protein Interaction databases
BioGRIDNPNT
STRING (EMBL)NPNT
ZODIACNPNT
Ontologies - Pathways
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNPNT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:23:09 CEST 2021

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