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NPS (neuropeptide S)

Identity

Other alias-
HGNC (Hugo) NPS
LocusID (NCBI) 594857
Atlas_Id 70950
Location 10q26.2  [Link to chromosome band 10q26]
Location_base_pair Starts at 127549349 and ends at 127552671 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NPS   33940
Cards
Entrez_Gene (NCBI)NPS  594857  neuropeptide S
Aliases
GeneCards (Weizmann)NPS
Ensembl hg19 (Hinxton)ENSG00000214285 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214285 [Gene_View]  chr10:127549349-127552671 [Contig_View]  NPS [Vega]
ICGC DataPortalENSG00000214285
TCGA cBioPortalNPS
AceView (NCBI)NPS
Genatlas (Paris)NPS
WikiGenes594857
SOURCE (Princeton)NPS
Genetics Home Reference (NIH)NPS
Genomic and cartography
GoldenPath hg38 (UCSC)NPS  -     chr10:127549349-127552671 +  10q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NPS  -     10q26.2   [Description]    (hg19-Feb_2009)
EnsemblNPS - 10q26.2 [CytoView hg19]  NPS - 10q26.2 [CytoView hg38]
Mapping of homologs : NCBINPS [Mapview hg19]  NPS [Mapview hg38]
OMIM609513   
Gene and transcription
Genbank (Entrez)BC148465 BC156665
RefSeq transcript (Entrez)NM_001030013
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NPS
Cluster EST : UnigeneHs.643423 [ NCBI ]
CGAP (NCI)Hs.643423
Alternative Splicing GalleryENSG00000214285
Gene ExpressionNPS [ NCBI-GEO ]   NPS [ EBI - ARRAY_EXPRESS ]   NPS [ SEEK ]   NPS [ MEM ]
Gene Expression Viewer (FireBrowse)NPS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)594857
GTEX Portal (Tissue expression)NPS
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0C0P6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0C0P6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0C0P6
Splice isoforms : SwissVarP0C0P6
PhosPhoSitePlusP0C0P6
Domains : Interpro (EBI)Neuropeptide_S   
Domain families : Pfam (Sanger)Neuropeptide_S (PF14993)   
Domain families : Pfam (NCBI)pfam14993   
Conserved Domain (NCBI)NPS
DMDM Disease mutations594857
Blocks (Seattle)NPS
SuperfamilyP0C0P6
Human Protein AtlasENSG00000214285
Peptide AtlasP0C0P6
IPIIPI00656148   
Protein Interaction databases
DIP (DOE-UCLA)P0C0P6
IntAct (EBI)P0C0P6
FunCoupENSG00000214285
BioGRIDNPS
STRING (EMBL)NPS
ZODIACNPS
Ontologies - Pathways
QuickGOP0C0P6
Ontology : AmiGOextracellular region  neuropeptide signaling pathway  visual learning  positive regulation of circadian sleep/wake cycle, wakefulness  positive regulation of synaptic transmission, GABAergic  positive regulation of action potential  positive regulation of synaptic transmission, glutamatergic  
Ontology : EGO-EBIextracellular region  neuropeptide signaling pathway  visual learning  positive regulation of circadian sleep/wake cycle, wakefulness  positive regulation of synaptic transmission, GABAergic  positive regulation of action potential  positive regulation of synaptic transmission, glutamatergic  
NDEx NetworkNPS
Atlas of Cancer Signalling NetworkNPS
Wikipedia pathwaysNPS
Orthology - Evolution
OrthoDB594857
GeneTree (enSembl)ENSG00000214285
Phylogenetic Trees/Animal Genes : TreeFamNPS
HOVERGENP0C0P6
HOGENOMP0C0P6
Homologs : HomoloGeneNPS
Homology/Alignments : Family Browser (UCSC)NPS
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNPS [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NPS
dbVarNPS
ClinVarNPS
1000_GenomesNPS 
Exome Variant ServerNPS
ExAC (Exome Aggregation Consortium)NPS (select the gene name)
Genetic variants : HAPMAP594857
Genomic Variants (DGV)NPS [DGVbeta]
DECIPHERNPS [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNPS 
Mutations
ICGC Data PortalNPS 
TCGA Data PortalNPS 
Broad Tumor PortalNPS
OASIS PortalNPS [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNPS  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNPS
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NPS
DgiDB (Drug Gene Interaction Database)NPS
DoCM (Curated mutations)NPS (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NPS (select a term)
intoGenNPS
Cancer3DNPS(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609513   
Orphanet
MedgenNPS
Genetic Testing Registry NPS
NextProtP0C0P6 [Medical]
TSGene594857
GENETestsNPS
Target ValidationNPS
Huge Navigator NPS [HugePedia]
snp3D : Map Gene to Disease594857
BioCentury BCIQNPS
ClinGenNPS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD594857
Chemical/Pharm GKB GenePA162398160
Clinical trialNPS
Miscellaneous
canSAR (ICR)NPS (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNPS
EVEXNPS
GoPubMedNPS
iHOPNPS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:17 CEST 2017

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