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NPSR1-AS1 (NPSR1 antisense RNA 1)

Identity

Alias_namesNPSR1 antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)AAA1
IMAGE:4827585
Other alias
HGNC (Hugo) NPSR1-AS1
LocusID (NCBI) 404744
Atlas_Id 70951
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 34718862 and ends at 34834329 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
NCAPD2 (12p13.31) / NPSR1-AS1 (7p14.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NPSR1-AS1   22128
Cards
Entrez_Gene (NCBI)NPSR1-AS1  404744  NPSR1 antisense RNA 1
AliasesAAA1
GeneCards (Weizmann)NPSR1-AS1
Ensembl hg19 (Hinxton)ENSG00000197085 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197085 [Gene_View]  chr7:34718862-34834329 [Contig_View]  NPSR1-AS1 [Vega]
ICGC DataPortalENSG00000197085
TCGA cBioPortalNPSR1-AS1
AceView (NCBI)NPSR1-AS1
Genatlas (Paris)NPSR1-AS1
WikiGenes404744
SOURCE (Princeton)NPSR1-AS1
Genetics Home Reference (NIH)NPSR1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)NPSR1-AS1  -     chr7:34718862-34834329 -  7p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NPSR1-AS1  -     7p14.3   [Description]    (hg19-Feb_2009)
EnsemblNPSR1-AS1 - 7p14.3 [CytoView hg19]  NPSR1-AS1 - 7p14.3 [CytoView hg38]
Mapping of homologs : NCBINPSR1-AS1 [Mapview hg19]  NPSR1-AS1 [Mapview hg38]
OMIM608596   
Gene and transcription
Genbank (Entrez)AY312364 AY312365 AY312366 AY312367 AY312368
RefSeq transcript (Entrez)NM_207283 NM_207284 NM_207285 NM_207286 NM_207287 NM_207288 NM_207289 NM_207290
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NPSR1-AS1
Cluster EST : UnigeneHs.487951 [ NCBI ]
CGAP (NCI)Hs.487951
Alternative Splicing GalleryENSG00000197085
Gene ExpressionNPSR1-AS1 [ NCBI-GEO ]   NPSR1-AS1 [ EBI - ARRAY_EXPRESS ]   NPSR1-AS1 [ SEEK ]   NPSR1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)NPSR1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)404744
GTEX Portal (Tissue expression)NPSR1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NPSR1-AS1
DMDM Disease mutations404744
Blocks (Seattle)NPSR1-AS1
Human Protein AtlasENSG00000197085
HPRD12265
IPIIPI00410394   IPI00985020   
Protein Interaction databases
FunCoupENSG00000197085
BioGRIDNPSR1-AS1
STRING (EMBL)NPSR1-AS1
ZODIACNPSR1-AS1
Ontologies - Pathways
Huge Navigator NPSR1-AS1 [HugePedia]
snp3D : Map Gene to Disease404744
BioCentury BCIQNPSR1-AS1
ClinGenNPSR1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD404744
Clinical trialNPSR1-AS1
Miscellaneous
canSAR (ICR)NPSR1-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNPSR1-AS1
EVEXNPSR1-AS1
GoPubMedNPSR1-AS1
iHOPNPSR1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:17 CEST 2017

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