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NPW (neuropeptide W)

Identity

Alias_symbol (synonym)PPL8
Other aliasL8
L8C
PPNPW
HGNC (Hugo) NPW
LocusID (NCBI) 283869
Atlas_Id 70956
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 2019520 and ends at 2020755 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NPW   30509
Cards
Entrez_Gene (NCBI)NPW  283869  neuropeptide W
AliasesL8; L8C; PPL8; PPNPW
GeneCards (Weizmann)NPW
Ensembl hg19 (Hinxton)ENSG00000183971 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183971 [Gene_View]  chr16:2019520-2020755 [Contig_View]  NPW [Vega]
ICGC DataPortalENSG00000183971
TCGA cBioPortalNPW
AceView (NCBI)NPW
Genatlas (Paris)NPW
WikiGenes283869
SOURCE (Princeton)NPW
Genetics Home Reference (NIH)NPW
Genomic and cartography
GoldenPath hg38 (UCSC)NPW  -     chr16:2019520-2020755 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NPW  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblNPW - 16p13.3 [CytoView hg19]  NPW - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBINPW [Mapview hg19]  NPW [Mapview hg38]
OMIM607997   
Gene and transcription
Genbank (Entrez)AB084276 AL365519 AL365521 BC150534 BC160149
RefSeq transcript (Entrez)NM_001099456
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NPW
Cluster EST : UnigeneHs.233533 [ NCBI ]
CGAP (NCI)Hs.233533
Alternative Splicing GalleryENSG00000183971
Gene ExpressionNPW [ NCBI-GEO ]   NPW [ EBI - ARRAY_EXPRESS ]   NPW [ SEEK ]   NPW [ MEM ]
Gene Expression Viewer (FireBrowse)NPW [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283869
GTEX Portal (Tissue expression)NPW
Human Protein AtlasENSG00000183971-NPW [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N729   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N729  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N729
Splice isoforms : SwissVarQ8N729
PhosPhoSitePlusQ8N729
Domains : Interpro (EBI)Neuropept_BW_pre    Neuropept_W_pre   
Domain families : Pfam (Sanger)NPBW (PF15180)   
Domain families : Pfam (NCBI)pfam15180   
Domain structure : Prodom (Prabi Lyon)Neuropept_W_pre (PD601995)   
Conserved Domain (NCBI)NPW
DMDM Disease mutations283869
Blocks (Seattle)NPW
SuperfamilyQ8N729
Human Protein Atlas [tissue]ENSG00000183971-NPW [tissue]
Peptide AtlasQ8N729
IPIIPI00853190   
Protein Interaction databases
DIP (DOE-UCLA)Q8N729
IntAct (EBI)Q8N729
FunCoupENSG00000183971
BioGRIDNPW
STRING (EMBL)NPW
ZODIACNPW
Ontologies - Pathways
QuickGOQ8N729
Ontology : AmiGOG-protein coupled receptor binding  protein binding  extracellular region  G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  feeding behavior  
Ontology : EGO-EBIG-protein coupled receptor binding  protein binding  extracellular region  G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  feeding behavior  
NDEx NetworkNPW
Atlas of Cancer Signalling NetworkNPW
Wikipedia pathwaysNPW
Orthology - Evolution
OrthoDB283869
GeneTree (enSembl)ENSG00000183971
Phylogenetic Trees/Animal Genes : TreeFamNPW
HOVERGENQ8N729
HOGENOMQ8N729
Homologs : HomoloGeneNPW
Homology/Alignments : Family Browser (UCSC)NPW
Gene fusions - Rearrangements
Fusion: Tumor Portal NPW
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNPW [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NPW
dbVarNPW
ClinVarNPW
1000_GenomesNPW 
Exome Variant ServerNPW
ExAC (Exome Aggregation Consortium)ENSG00000183971
GNOMAD BrowserENSG00000183971
Genetic variants : HAPMAP283869
Genomic Variants (DGV)NPW [DGVbeta]
DECIPHERNPW [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNPW 
Mutations
ICGC Data PortalNPW 
TCGA Data PortalNPW 
Broad Tumor PortalNPW
OASIS PortalNPW [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNPW  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNPW
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NPW
DgiDB (Drug Gene Interaction Database)NPW
DoCM (Curated mutations)NPW (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NPW (select a term)
intoGenNPW
Cancer3DNPW(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607997   
Orphanet
MedgenNPW
Genetic Testing Registry NPW
NextProtQ8N729 [Medical]
TSGene283869
GENETestsNPW
Target ValidationNPW
Huge Navigator NPW [HugePedia]
snp3D : Map Gene to Disease283869
BioCentury BCIQNPW
ClinGenNPW
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283869
Chemical/Pharm GKB GenePA142671248
Clinical trialNPW
Miscellaneous
canSAR (ICR)NPW (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNPW
EVEXNPW
GoPubMedNPW
iHOPNPW
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:19:21 CET 2017

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