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NPY4R (neuropeptide Y receptor Y4)

Identity

Other aliasNPY4-R
PP1
PPYR1
Y4
HGNC (Hugo) NPY4R
LocusID (NCBI) 5540
Atlas_Id 56655
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 46461099 and ends at 46465881 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NPY4R   9329
Cards
Entrez_Gene (NCBI)NPY4R  5540  neuropeptide Y receptor Y4
AliasesNPY4-R; PP1; PPYR1; Y4
GeneCards (Weizmann)NPY4R
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:46461099-46465881 [Contig_View]  NPY4R [Vega]
TCGA cBioPortalNPY4R
AceView (NCBI)NPY4R
Genatlas (Paris)NPY4R
WikiGenes5540
SOURCE (Princeton)NPY4R
Genetics Home Reference (NIH)NPY4R
Genomic and cartography
GoldenPath hg38 (UCSC)NPY4R  -     chr10:46461099-46465881 -  10q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NPY4R  -     10q11.22   [Description]    (hg19-Feb_2009)
EnsemblNPY4R - 10q11.22 [CytoView hg19]  NPY4R - 10q11.22 [CytoView hg38]
Mapping of homologs : NCBINPY4R [Mapview hg19]  NPY4R [Mapview hg38]
OMIM601790   
Gene and transcription
Genbank (Entrez)AY649985 AY649986 BC096238 BC099637 CR541950
RefSeq transcript (Entrez)NM_001278794 NM_005972
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NPY4R
Cluster EST : UnigeneHs.524719 [ NCBI ]
CGAP (NCI)Hs.524719
Gene ExpressionNPY4R [ NCBI-GEO ]   NPY4R [ EBI - ARRAY_EXPRESS ]   NPY4R [ SEEK ]   NPY4R [ MEM ]
Gene Expression Viewer (FireBrowse)NPY4R [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5540
GTEX Portal (Tissue expression)NPY4R
Protein : pattern, domain, 3D structure
UniProt/SwissProtP50391   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP50391  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP50391
Splice isoforms : SwissVarP50391
PhosPhoSitePlusP50391
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    NPY4_rcpt    NPY_rcpt   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)NPY4R
DMDM Disease mutations5540
Blocks (Seattle)NPY4R
PDB (SRS)2IK5   
PDB (PDBSum)2IK5   
PDB (IMB)2IK5   
PDB (RSDB)2IK5   
Structural Biology KnowledgeBase2IK5   
SCOP (Structural Classification of Proteins)2IK5   
CATH (Classification of proteins structures)2IK5   
SuperfamilyP50391
Peptide AtlasP50391
IPIIPI00031457   IPI00984955   
Protein Interaction databases
DIP (DOE-UCLA)P50391
IntAct (EBI)P50391
BioGRIDNPY4R
STRING (EMBL)NPY4R
ZODIACNPY4R
Ontologies - Pathways
QuickGOP50391
Ontology : AmiGOpancreatic polypeptide receptor activity  G-protein coupled receptor activity  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  chemical synaptic transmission  digestion  feeding behavior  blood circulation  
Ontology : EGO-EBIpancreatic polypeptide receptor activity  G-protein coupled receptor activity  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  chemical synaptic transmission  digestion  feeding behavior  blood circulation  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkNPY4R
Atlas of Cancer Signalling NetworkNPY4R
Wikipedia pathwaysNPY4R
Orthology - Evolution
OrthoDB5540
Phylogenetic Trees/Animal Genes : TreeFamNPY4R
HOVERGENP50391
HOGENOMP50391
Homologs : HomoloGeneNPY4R
Homology/Alignments : Family Browser (UCSC)NPY4R
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNPY4R [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NPY4R
dbVarNPY4R
ClinVarNPY4R
1000_GenomesNPY4R 
Exome Variant ServerNPY4R
ExAC (Exome Aggregation Consortium)NPY4R (select the gene name)
Genetic variants : HAPMAP5540
Genomic Variants (DGV)NPY4R [DGVbeta]
DECIPHERNPY4R [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNPY4R 
Mutations
ICGC Data PortalNPY4R 
TCGA Data PortalNPY4R 
Broad Tumor PortalNPY4R
OASIS PortalNPY4R [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNPY4R
BioMutasearch NPY4R
DgiDB (Drug Gene Interaction Database)NPY4R
DoCM (Curated mutations)NPY4R (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NPY4R (select a term)
intoGenNPY4R
Cancer3DNPY4R(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601790   
Orphanet
MedgenNPY4R
Genetic Testing Registry NPY4R
NextProtP50391 [Medical]
TSGene5540
GENETestsNPY4R
Huge Navigator NPY4R [HugePedia]
snp3D : Map Gene to Disease5540
BioCentury BCIQNPY4R
ClinGenNPY4R
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD5540
Chemical/Pharm GKB GenePA33692
Clinical trialNPY4R
Miscellaneous
canSAR (ICR)NPY4R (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNPY4R
EVEXNPY4R
GoPubMedNPY4R
iHOPNPY4R
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:29:06 CEST 2017

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