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NPY4R (neuropeptide Y receptor Y4)

Identity

Alias (NCBI)NPY4-R
PP1
PPYR1
Y4
HGNC (Hugo) NPY4R
HGNC Alias symbY4
PP1
HGNC Previous namePPYR1
HGNC Previous namepancreatic polypeptide receptor 1
LocusID (NCBI) 5540
Atlas_Id 56655
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 46461099 and ends at 46465958 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)NPY4R   9329
Cards
Entrez_Gene (NCBI)NPY4R    neuropeptide Y receptor Y4
AliasesNPY4-R; PP1; PPYR1; Y4
GeneCards (Weizmann)NPY4R
Ensembl hg19 (Hinxton)ENSG00000204174 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204174 [Gene_View]  ENSG00000204174 [Sequence]  chr10:46461099-46465958 [Contig_View]  NPY4R [Vega]
ICGC DataPortalENSG00000204174
TCGA cBioPortalNPY4R
AceView (NCBI)NPY4R
Genatlas (Paris)NPY4R
SOURCE (Princeton)NPY4R
Genetics Home Reference (NIH)NPY4R
Genomic and cartography
GoldenPath hg38 (UCSC)NPY4R  -     chr10:46461099-46465958 -  10q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NPY4R  -     10q11.22   [Description]    (hg19-Feb_2009)
GoldenPathNPY4R - 10q11.22 [CytoView hg19]  NPY4R - 10q11.22 [CytoView hg38]
ImmunoBaseENSG00000204174
Genome Data Viewer NCBINPY4R [Mapview hg19]  
OMIM601790   
Gene and transcription
Genbank (Entrez)AY649985 AY649986 BC096238 BC099637 CR541950
RefSeq transcript (Entrez)NM_001278794 NM_005972
Consensus coding sequences : CCDS (NCBI)NPY4R
Gene ExpressionNPY4R [ NCBI-GEO ]   NPY4R [ EBI - ARRAY_EXPRESS ]   NPY4R [ SEEK ]   NPY4R [ MEM ]
Gene Expression Viewer (FireBrowse)NPY4R [ Firebrowse - Broad ]
GenevisibleExpression of NPY4R in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5540
GTEX Portal (Tissue expression)NPY4R
Human Protein AtlasENSG00000204174-NPY4R [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP50391   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP50391  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP50391
PhosPhoSitePlusP50391
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    NPY4_rcpt    NPY_rcpt   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)NPY4R
PDB (RSDB)2IK5   
PDB Europe2IK5   
PDB (PDBSum)2IK5   
PDB (IMB)2IK5   
Structural Biology KnowledgeBase2IK5   
SCOP (Structural Classification of Proteins)2IK5   
CATH (Classification of proteins structures)2IK5   
SuperfamilyP50391
AlphaFold pdb e-kbP50391   
Human Protein Atlas [tissue]ENSG00000204174-NPY4R [tissue]
Protein Interaction databases
DIP (DOE-UCLA)P50391
IntAct (EBI)P50391
BioGRIDNPY4R
STRING (EMBL)NPY4R
ZODIACNPY4R
Ontologies - Pathways
QuickGOP50391
Ontology : AmiGO
Ontology : EGO-EBI
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkNPY4R
Atlas of Cancer Signalling NetworkNPY4R
Wikipedia pathwaysNPY4R
Orthology - Evolution
OrthoDB5540
GeneTree (enSembl)ENSG00000204174
Phylogenetic Trees/Animal Genes : TreeFamNPY4R
Homologs : HomoloGeneNPY4R
Homology/Alignments : Family Browser (UCSC)NPY4R
Gene fusions - Rearrangements
Fusion : QuiverNPY4R
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNPY4R [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NPY4R
dbVarNPY4R
ClinVarNPY4R
MonarchNPY4R
1000_GenomesNPY4R 
Exome Variant ServerNPY4R
GNOMAD BrowserENSG00000204174
Varsome BrowserNPY4R
ACMGNPY4R variants
VarityP50391
Genomic Variants (DGV)NPY4R [DGVbeta]
DECIPHERNPY4R [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNPY4R 
Mutations
ICGC Data PortalNPY4R 
TCGA Data PortalNPY4R 
Broad Tumor PortalNPY4R
OASIS PortalNPY4R [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNPY4R  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DNPY4R
Mutations and Diseases : HGMDNPY4R
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaNPY4R
DgiDB (Drug Gene Interaction Database)NPY4R
DoCM (Curated mutations)NPY4R
CIViC (Clinical Interpretations of Variants in Cancer)NPY4R
Cancer3DNPY4R
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601790   
Orphanet
DisGeNETNPY4R
MedgenNPY4R
Genetic Testing Registry NPY4R
NextProtP50391 [Medical]
GENETestsNPY4R
Target ValidationNPY4R
Huge Navigator NPY4R [HugePedia]
ClinGenNPY4R
Clinical trials, drugs, therapy
MyCancerGenomeNPY4R
Protein Interactions : CTDNPY4R
Pharm GKB GenePA33692
PharosP50391
Clinical trialNPY4R
Miscellaneous
canSAR (ICR)NPY4R
HarmonizomeNPY4R
DataMed IndexNPY4R
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNPY4R
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:23:12 CEST 2021

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