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NPY5R (neuropeptide Y receptor Y5)

Identity

Alias_symbol (synonym)NPYR5
Other aliasNPY5-R
NPYY5-R
HGNC (Hugo) NPY5R
LocusID (NCBI) 4889
Atlas_Id 51584
Location 4q32.2  [Link to chromosome band 4q32]
Location_base_pair Starts at 164265254 and ends at 164273086 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NPY5R   7958
Cards
Entrez_Gene (NCBI)NPY5R  4889  neuropeptide Y receptor Y5
AliasesNPY5-R; NPYR5; NPYY5-R
GeneCards (Weizmann)NPY5R
Ensembl hg19 (Hinxton)ENSG00000164129 [Gene_View]  chr4:164265254-164273086 [Contig_View]  NPY5R [Vega]
Ensembl hg38 (Hinxton)ENSG00000164129 [Gene_View]  chr4:164265254-164273086 [Contig_View]  NPY5R [Vega]
ICGC DataPortalENSG00000164129
TCGA cBioPortalNPY5R
AceView (NCBI)NPY5R
Genatlas (Paris)NPY5R
WikiGenes4889
SOURCE (Princeton)NPY5R
Genetics Home Reference (NIH)NPY5R
Genomic and cartography
GoldenPath hg19 (UCSC)NPY5R  -     chr4:164265254-164273086 +  4q32.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NPY5R  -     4q32.2   [Description]    (hg38-Dec_2013)
EnsemblNPY5R - 4q32.2 [CytoView hg19]  NPY5R - 4q32.2 [CytoView hg38]
Mapping of homologs : NCBINPY5R [Mapview hg19]  NPY5R [Mapview hg38]
OMIM602001   
Gene and transcription
Genbank (Entrez)BC034224 BC042416 BI464162 HY025097 U56079
RefSeq transcript (Entrez)NM_001317091 NM_001317092 NM_006174
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)NPY5R
Cluster EST : UnigeneHs.598503 [ NCBI ]
CGAP (NCI)Hs.598503
Alternative Splicing GalleryENSG00000164129
Gene ExpressionNPY5R [ NCBI-GEO ]   NPY5R [ EBI - ARRAY_EXPRESS ]   NPY5R [ SEEK ]   NPY5R [ MEM ]
Gene Expression Viewer (FireBrowse)NPY5R [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4889
GTEX Portal (Tissue expression)NPY5R
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15761   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15761  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15761
Splice isoforms : SwissVarQ15761
PhosPhoSitePlusQ15761
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    NPY5_rcpt    NPY_rcpt   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)NPY5R
DMDM Disease mutations4889
Blocks (Seattle)NPY5R
PDB (SRS)2HE6   
PDB (PDBSum)2HE6   
PDB (IMB)2HE6   
PDB (RSDB)2HE6   
Structural Biology KnowledgeBase2HE6   
SCOP (Structural Classification of Proteins)2HE6   
CATH (Classification of proteins structures)2HE6   
SuperfamilyQ15761
Human Protein AtlasENSG00000164129
Peptide AtlasQ15761
HPRD03591
IPIIPI00019491   
Protein Interaction databases
DIP (DOE-UCLA)Q15761
IntAct (EBI)Q15761
FunCoupENSG00000164129
BioGRIDNPY5R
STRING (EMBL)NPY5R
ZODIACNPY5R
Ontologies - Pathways
QuickGOQ15761
Ontology : AmiGOpeptide YY receptor activity  pancreatic polypeptide receptor activity  positive regulation of acute inflammatory response  outflow tract morphogenesis  cardiac left ventricle morphogenesis  neuropeptide Y receptor activity  cytoplasm  plasma membrane  integral component of plasma membrane  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  synaptic transmission  feeding behavior  negative regulation of glutamate secretion  negative regulation of synaptic transmission, GABAergic  eating behavior  neuron projection  negative regulation of apoptotic process  positive regulation of smooth muscle cell proliferation  generation of ovulation cycle rhythm  
Ontology : EGO-EBIpeptide YY receptor activity  pancreatic polypeptide receptor activity  positive regulation of acute inflammatory response  outflow tract morphogenesis  cardiac left ventricle morphogenesis  neuropeptide Y receptor activity  cytoplasm  plasma membrane  integral component of plasma membrane  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  synaptic transmission  feeding behavior  negative regulation of glutamate secretion  negative regulation of synaptic transmission, GABAergic  eating behavior  neuron projection  negative regulation of apoptotic process  positive regulation of smooth muscle cell proliferation  generation of ovulation cycle rhythm  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkNPY5R
Atlas of Cancer Signalling NetworkNPY5R
Wikipedia pathwaysNPY5R
Orthology - Evolution
OrthoDB4889
GeneTree (enSembl)ENSG00000164129
Phylogenetic Trees/Animal Genes : TreeFamNPY5R
HOVERGENQ15761
HOGENOMQ15761
Homologs : HomoloGeneNPY5R
Homology/Alignments : Family Browser (UCSC)NPY5R
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNPY5R [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NPY5R
dbVarNPY5R
ClinVarNPY5R
1000_GenomesNPY5R 
Exome Variant ServerNPY5R
ExAC (Exome Aggregation Consortium)NPY5R (select the gene name)
Genetic variants : HAPMAP4889
Genomic Variants (DGV)NPY5R [DGVbeta]
DECIPHER (Syndromes)4:164265254-164273086  ENSG00000164129
CONAN: Copy Number AnalysisNPY5R 
Mutations
ICGC Data PortalNPY5R 
TCGA Data PortalNPY5R 
Broad Tumor PortalNPY5R
OASIS PortalNPY5R [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNPY5R  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNPY5R
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NPY5R
DgiDB (Drug Gene Interaction Database)NPY5R
DoCM (Curated mutations)NPY5R (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NPY5R (select a term)
intoGenNPY5R
Cancer3DNPY5R(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602001   
Orphanet
MedgenNPY5R
Genetic Testing Registry NPY5R
NextProtQ15761 [Medical]
TSGene4889
GENETestsNPY5R
Huge Navigator NPY5R [HugePedia]
snp3D : Map Gene to Disease4889
BioCentury BCIQNPY5R
ClinGenNPY5R
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4889
Chemical/Pharm GKB GenePA31742
Clinical trialNPY5R
Miscellaneous
canSAR (ICR)NPY5R (select the gene name)
Probes
Litterature
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNPY5R
EVEXNPY5R
GoPubMedNPY5R
iHOPNPY5R
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:19:17 CET 2017

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