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NR1D2 (nuclear receptor subfamily 1, group D, member 2)

Identity

Other namesBD73
EAR-1r
HZF2
Hs.37288
RVR
HGNC NR1D2
Location 3p24.2
Location_base_pair Starts at 23961810 and ends at 23996241 bp from pter ( according to hg18-March_2006).
Note

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNCNR1D2   7963
Entrez_GeneNR1D2  9975  nuclear receptor subfamily 1, group D, member 2
Cards
GeneCardsNR1D2
EnsemblENSG00000174738 [Gene_View]  NR1D2 [Vega]
GenatlasNR1D2
Genomic and cartography
GoldenPathNR1D2  -  3p24.2   chr3:23961810-23996241 +  3p24.2   [Description]    (hg18-March_2006)
EnsemblNR1D2 - 3p24.2 [CytoView]
NCBIMapview
OMIM602304 Disease map [OMIM]
HomoloGeneNR1D2
Gene and transcription
GenbankAB209091 [ ENTREZ ]
GenbankAK313464 [ ENTREZ ]
GenbankBC015929 [ ENTREZ ]
GenbankBC045613 [ ENTREZ ]
GenbankBC070035 [ ENTREZ ]
RefSeqNM_005126 [ SRS ]    NM_005126 [ ENTREZ ]
RefSeqAC_000046 [ SRS ]    AC_000046 [ ENTREZ ]
RefSeqAC_000135 [ SRS ]    AC_000135 [ ENTREZ ]
RefSeqNC_000003 [ SRS ]    NC_000003 [ ENTREZ ]
RefSeqNT_022517 [ SRS ]    NT_022517 [ ENTREZ ]
RefSeqNW_001838877 [ SRS ]    NW_001838877 [ ENTREZ ]
RefSeqNW_921651 [ SRS ]    NW_921651 [ ENTREZ ]
CCDSNR1D2 CCDS - NCBI
AceViewNR1D2 AceView - NCBI
UnigeneHs.37288 [ SRS ]    Hs.37288 [ NCBI ]
Fast-db3040 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtQ14995 [ SRS]    Q14995 [ EXPASY ]     Q14995 [ INTERPRO ]     Q14995 [ UNIPROT ] Q14995 [ VarSplice FASTA ]
PrositePS00031 NUCLEAR_REC_DBD_1 [ SRS ]    PS00031 NUCLEAR_REC_DBD_1 [ Expasy ]
PrositePS51030 NUCLEAR_REC_DBD_2 [ SRS ]    PS51030 NUCLEAR_REC_DBD_2 [ Expasy ]
InterproIPR008946 Nucl_hormone_rcpt_ligand-bd [ SRS ]    IPR008946 Nucl_hormone_rcpt_ligand-bd [ EBI ]
InterproIPR000536 Nucl_hrmn_rcpt_lig-bd_core [ SRS ]    IPR000536 Nucl_hrmn_rcpt_lig-bd_core [ EBI ]
InterproIPR001723 Str_hrmn_rcpt [ SRS ]    IPR001723 Str_hrmn_rcpt [ EBI ]
InterproIPR000324 VitD_rcpt [ SRS ]    IPR000324 VitD_rcpt [ EBI ]
InterproIPR001628 Znf_hrmn_rcpt [ SRS ]    IPR001628 Znf_hrmn_rcpt [ EBI ]
InterproIPR013088 Znf_NHR/GATA [ SRS ]    IPR013088 Znf_NHR/GATA [ EBI ]
CluSTrQ14995
PfamPF00104 Hormone_recep [ SRS ]    PF00104 Hormone_recep [ Sanger ]    pfam00104 [ NCBI-CDD ]
PfamPF00105 zf-C4 [ SRS ]    PF00105 zf-C4 [ Sanger ]    pfam00105 [ NCBI-CDD ]
SmartSM00430 HOLI [EMBL]
SmartSM00399 ZnF_C4 [EMBL]
ProdomPD000035 Znf_C4steroid[INRA-Toulouse]
ProdomQ14995 NR1D2_HUMAN [ Domain structure ]   Q14995 NR1D2_HUMAN  [ sequences sharing at least 1 domain ]
BlocksQ14995
PDB2V0V [ SRS ]    2V0V [ PdbSum ],   2V0V [ IMB ]   2V0V [ RSDB ]
PDB2V7C [ SRS ]    2V7C [ PdbSum ],   2V7C [ IMB ]   2V7C [ RSDB ]
HPRD03809
Protein Interaction databases
DIPQ14995
IntActQ14995
Polymorphism : SNP, mutations, diseases
OMIM602304    [ map ]   
GENETests602304
SNPNR1D2 [dbSNP-NCBI]  
SNPNM_005126 [SNP-NCI]  
SNPNR1D2 [GeneSNPs - Utah]  NR1D2] [HGBASE - SRS]
HAPMAPNR1D2 [HAPMAP]  
COSMICNR1D2 [Somatic mutation (COSMIC-CGP-Sanger)]  
HGMDNR1D2
Genetic AssociationNR1D2
CDC HuGENR1D2
General knowledge
Family BrowserNR1D2 [UCSC Family Browser]
SOURCENM_005126
SMDHs.37288
SAGEHs.37288
GOtranscription factor activity [Amigo]  transcription factor activity
GOsteroid hormone receptor activity [Amigo]  steroid hormone receptor activity
GOligand-dependent nuclear receptor activity [Amigo]  ligand-dependent nuclear receptor activity
GOnucleus [Amigo]  nucleus
GOnucleus [Amigo]  nucleus
GOtranscription [Amigo]  transcription
GOregulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GOregulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GOzinc ion binding [Amigo]  zinc ion binding
GOsequence-specific DNA binding [Amigo]  sequence-specific DNA binding
GOmetal ion binding [Amigo]  metal ion binding
PubGeneNR1D2
TreeFamNR1D2
CTD9975 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeNR1D2 Related clones (RZPD - Berlin)
PubMed
PubMed10 Pubmed reference(s) in Entrez
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2008Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 27 14:00:50 2008


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