NR2C2 (nuclear receptor subfamily 2, group C, member 2)

Identity

Other names	TAK1
	TR2R1
	TR4
	hTAK1
HGNC	NR2C2
Location	3p25
Location_base_pair	Starts at 14964240 and ends at 15065784 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	NR2C2   7972
Entrez_Gene	NR2C2  7182  nuclear receptor subfamily 2, group C, member 2
	Cards
GeneCards	NR2C2
Ensembl	ENSG00000177463 [Gene_View]  NR2C2 [Vega]
Genatlas	NR2C2
	Genomic and cartography
GoldenPath	NR2C2  -  3p25   chr3:14964240-15065784 +  3p24.3   [Description]    (hg18-March_2006)
Ensembl	NR2C2 - 3p24.3 [CytoView]
NCBI	Mapview
OMIM	601426 Disease map [OMIM]
HomoloGene	NR2C2
	Gene and transcription
Genbank	AK091226 [ ENTREZ ]
Genbank	AK094590 [ ENTREZ ]
Genbank	AK290590 [ ENTREZ ]
Genbank	BC030715 [ ENTREZ ]
Genbank	BC051670 [ ENTREZ ]
RefSeq	NM_003298 [ SRS ]    NM_003298 [ ENTREZ ]
RefSeq	AC_000046 [ SRS ]    AC_000046 [ ENTREZ ]
RefSeq	AC_000135 [ SRS ]    AC_000135 [ ENTREZ ]
RefSeq	NC_000003 [ SRS ]    NC_000003 [ ENTREZ ]
RefSeq	NT_022517 [ SRS ]    NT_022517 [ ENTREZ ]
RefSeq	NW_001838877 [ SRS ]    NW_001838877 [ ENTREZ ]
RefSeq	NW_921651 [ SRS ]    NW_921651 [ ENTREZ ]
CCDS	NR2C2 CCDS - NCBI
AceView	NR2C2 AceView - NCBI
Unigene	Hs.591667 [ SRS ]    Hs.591667 [ NCBI ]
Fast-db	2648 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P49116 [ SRS]    P49116 [ EXPASY ]     P49116 [ INTERPRO ]     P49116 [ UNIPROT ] P49116 [ VarSplice FASTA ]
Prosite	PS00031 NUCLEAR_REC_DBD_1 [ SRS ]    PS00031 NUCLEAR_REC_DBD_1 [ Expasy ]
Prosite	PS51030 NUCLEAR_REC_DBD_2 [ SRS ]    PS51030 NUCLEAR_REC_DBD_2 [ Expasy ]
Interpro	IPR008946 Nucl_hormone_rcpt_ligand-bd [ SRS ]    IPR008946 Nucl_hormone_rcpt_ligand-bd [ EBI ]
Interpro	IPR000536 Nucl_hrmn_rcpt_lig-bd_core [ SRS ]    IPR000536 Nucl_hrmn_rcpt_lig-bd_core [ EBI ]
Interpro	IPR001723 Str_hrmn_rcpt [ SRS ]    IPR001723 Str_hrmn_rcpt [ EBI ]
Interpro	IPR000324 VitD_rcpt [ SRS ]    IPR000324 VitD_rcpt [ EBI ]
Interpro	IPR001628 Znf_hrmn_rcpt [ SRS ]    IPR001628 Znf_hrmn_rcpt [ EBI ]
Interpro	IPR013088 Znf_NHR/GATA [ SRS ]    IPR013088 Znf_NHR/GATA [ EBI ]
CluSTr	P49116
Pfam	PF00104 Hormone_recep [ SRS ]    PF00104 Hormone_recep [ Sanger ]    pfam00104 [ NCBI-CDD ]
Pfam	PF00105 zf-C4 [ SRS ]    PF00105 zf-C4 [ Sanger ]    pfam00105 [ NCBI-CDD ]
Smart	SM00430 HOLI [EMBL]
Smart	SM00399 ZnF_C4 [EMBL]
Prodom	PD000035 Znf_C4steroid[INRA-Toulouse]
Prodom	P49116 NR2C2_HUMAN [ Domain structure ]   P49116 NR2C2_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P49116
HPRD	03253
	Protein Interaction databases
DIP	P49116
IntAct	P49116
	Polymorphism : SNP, mutations, diseases
OMIM	601426    [ map ]
GENETests	601426
SNP	NR2C2 [dbSNP-NCBI]
SNP	NM_003298 [SNP-NCI]
SNP	NR2C2 [GeneSNPs - Utah]  NR2C2] [HGBASE - SRS]
HAPMAP	NR2C2 [HAPMAP]
COSMIC	NR2C2 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	NR2C2
Genetic Association	NR2C2
CDC HuGE	NR2C2
	General knowledge
Family Browser	NR2C2 [UCSC Family Browser]
SOURCE	NM_003298
SMD	Hs.591667
SAGE	Hs.591667
GO	transcription factor activity [Amigo]  transcription factor activity
GO	transcription factor activity [Amigo]  transcription factor activity
GO	steroid hormone receptor activity [Amigo]  steroid hormone receptor activity
GO	transcription coactivator activity [Amigo]  transcription coactivator activity
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	nervous system development [Amigo]  nervous system development
GO	zinc ion binding [Amigo]  zinc ion binding
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
GO	metal ion binding [Amigo]  metal ion binding
PubGene	NR2C2
TreeFam	NR2C2
CTD	7182 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	NR2C2 Related clones (RZPD - Berlin)
	PubMed
PubMed	19 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu Nov 27 14:00:53 2008