Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NRG1-IT3 (NRG1 intronic transcript 3)

Identity

Alias_namesNRG1 intronic transcript 3 (non-protein coding)
Other alias-
HGNC (Hugo) NRG1-IT3
LocusID (NCBI) 100874286
Atlas_Id 70967
Location 8p12  [Link to chromosome band 8p12]
Location_base_pair Starts at 32440746 and ends at 32442725 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NRG1-IT3   43635
Cards
Entrez_Gene (NCBI)NRG1-IT3  100874286  NRG1 intronic transcript 3
Aliases
GeneCards (Weizmann)NRG1-IT3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:32440746-32442725 [Contig_View]  NRG1-IT3 [Vega]
TCGA cBioPortalNRG1-IT3
AceView (NCBI)NRG1-IT3
Genatlas (Paris)NRG1-IT3
WikiGenes100874286
SOURCE (Princeton)NRG1-IT3
Genetics Home Reference (NIH)NRG1-IT3
Genomic and cartography
GoldenPath hg38 (UCSC)NRG1-IT3  -     chr8:32440746-32442725 +  8p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NRG1-IT3  -     8p12   [Description]    (hg19-Feb_2009)
EnsemblNRG1-IT3 - 8p12 [CytoView hg19]  NRG1-IT3 - 8p12 [CytoView hg38]
Mapping of homologs : NCBINRG1-IT3 [Mapview hg19]  NRG1-IT3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX111416
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NRG1-IT3
Cluster EST : UnigeneHs.147060 [ NCBI ]
CGAP (NCI)Hs.147060
Gene ExpressionNRG1-IT3 [ NCBI-GEO ]   NRG1-IT3 [ EBI - ARRAY_EXPRESS ]   NRG1-IT3 [ SEEK ]   NRG1-IT3 [ MEM ]
Gene Expression Viewer (FireBrowse)NRG1-IT3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874286
GTEX Portal (Tissue expression)NRG1-IT3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NRG1-IT3
DMDM Disease mutations100874286
Blocks (Seattle)NRG1-IT3
Protein Interaction databases
BioGRIDNRG1-IT3
STRING (EMBL)NRG1-IT3
ZODIACNRG1-IT3
Ontologies - Pathways
Huge Navigator NRG1-IT3 [HugePedia]
snp3D : Map Gene to Disease100874286
BioCentury BCIQNRG1-IT3
ClinGenNRG1-IT3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874286
Clinical trialNRG1-IT3
Miscellaneous
canSAR (ICR)NRG1-IT3 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineNRG1-IT3
EVEXNRG1-IT3
GoPubMedNRG1-IT3
iHOPNRG1-IT3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:19:23 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.