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NRM (nurim (nuclear envelope membrane protein))

Identity

Alias_symbol (synonym)NRM29
Other alias
HGNC (Hugo) NRM
LocusID (NCBI) 11270
Atlas_Id 70973
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 30688047 and ends at 30691129 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NRM   8003
Cards
Entrez_Gene (NCBI)NRM  11270  nurim (nuclear envelope membrane protein)
AliasesNRM29
GeneCards (Weizmann)NRM
Ensembl hg19 (Hinxton)ENSG00000137404 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000137404 [Gene_View]  chr6:30688047-30691129 [Contig_View]  NRM [Vega]
ICGC DataPortalENSG00000137404
TCGA cBioPortalNRM
AceView (NCBI)NRM
Genatlas (Paris)NRM
WikiGenes11270
SOURCE (Princeton)NRM
Genetics Home Reference (NIH)NRM
Genomic and cartography
GoldenPath hg38 (UCSC)NRM  -     chr6:30688047-30691129 -  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NRM  -     6p21.33   [Description]    (hg19-Feb_2009)
EnsemblNRM - 6p21.33 [CytoView hg19]  NRM - 6p21.33 [CytoView hg38]
Mapping of homologs : NCBINRM [Mapview hg19]  NRM [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF143676 AI521967 AK075509 AK298152 AK315190
RefSeq transcript (Entrez)NM_001270707 NM_001270708 NM_001270709 NM_001270710 NM_007243
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248
Consensus coding sequences : CCDS (NCBI)NRM
Cluster EST : UnigeneHs.519993 [ NCBI ]
CGAP (NCI)Hs.519993
Alternative Splicing GalleryENSG00000137404
Gene ExpressionNRM [ NCBI-GEO ]   NRM [ EBI - ARRAY_EXPRESS ]   NRM [ SEEK ]   NRM [ MEM ]
Gene Expression Viewer (FireBrowse)NRM [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11270
GTEX Portal (Tissue expression)NRM
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IXM6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IXM6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IXM6
Splice isoforms : SwissVarQ8IXM6
PhosPhoSitePlusQ8IXM6
Domains : Interpro (EBI)Nurim-like   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NRM
DMDM Disease mutations11270
Blocks (Seattle)NRM
SuperfamilyQ8IXM6
Human Protein AtlasENSG00000137404
Peptide AtlasQ8IXM6
HPRD10120
IPIIPI00217557   IPI00645046   IPI00791698   
Protein Interaction databases
DIP (DOE-UCLA)Q8IXM6
IntAct (EBI)Q8IXM6
FunCoupENSG00000137404
BioGRIDNRM
STRING (EMBL)NRM
ZODIACNRM
Ontologies - Pathways
QuickGOQ8IXM6
Ontology : AmiGOmolecular_function  protein binding  nuclear envelope  nuclear inner membrane  biological_process  membrane  integral component of membrane  nuclear membrane  
Ontology : EGO-EBImolecular_function  protein binding  nuclear envelope  nuclear inner membrane  biological_process  membrane  integral component of membrane  nuclear membrane  
NDEx NetworkNRM
Atlas of Cancer Signalling NetworkNRM
Wikipedia pathwaysNRM
Orthology - Evolution
OrthoDB11270
GeneTree (enSembl)ENSG00000137404
Phylogenetic Trees/Animal Genes : TreeFamNRM
HOVERGENQ8IXM6
HOGENOMQ8IXM6
Homologs : HomoloGeneNRM
Homology/Alignments : Family Browser (UCSC)NRM
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNRM [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NRM
dbVarNRM
ClinVarNRM
1000_GenomesNRM 
Exome Variant ServerNRM
ExAC (Exome Aggregation Consortium)NRM (select the gene name)
Genetic variants : HAPMAP11270
Genomic Variants (DGV)NRM [DGVbeta]
DECIPHERNRM [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNRM 
Mutations
ICGC Data PortalNRM 
TCGA Data PortalNRM 
Broad Tumor PortalNRM
OASIS PortalNRM [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNRM  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNRM
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NRM
DgiDB (Drug Gene Interaction Database)NRM
DoCM (Curated mutations)NRM (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NRM (select a term)
intoGenNRM
Cancer3DNRM(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNRM
Genetic Testing Registry NRM
NextProtQ8IXM6 [Medical]
TSGene11270
GENETestsNRM
Target ValidationNRM
Huge Navigator NRM [HugePedia]
snp3D : Map Gene to Disease11270
BioCentury BCIQNRM
ClinGenNRM
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11270
Chemical/Pharm GKB GenePA31782
Clinical trialNRM
Miscellaneous
canSAR (ICR)NRM (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNRM
EVEXNRM
GoPubMedNRM
iHOPNRM
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:20 CEST 2017

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