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NRN1L (neuritin 1-like)

Identity

Alias_symbol (synonym)UNQ2446
MRCC2446
Other alias
HGNC (Hugo) NRN1L
LocusID (NCBI) 123904
Atlas_Id 70974
Location 16q22.1  [Link to chromosome band 16q22]
Location_base_pair Starts at 67918781 and ends at 67920271 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NRN1L   29811
Cards
Entrez_Gene (NCBI)NRN1L  123904  neuritin 1-like
AliasesUNQ2446
GeneCards (Weizmann)NRN1L
Ensembl hg19 (Hinxton)ENSG00000188038 [Gene_View]  chr16:67918781-67920271 [Contig_View]  NRN1L [Vega]
Ensembl hg38 (Hinxton)ENSG00000188038 [Gene_View]  chr16:67918781-67920271 [Contig_View]  NRN1L [Vega]
ICGC DataPortalENSG00000188038
TCGA cBioPortalNRN1L
AceView (NCBI)NRN1L
Genatlas (Paris)NRN1L
WikiGenes123904
SOURCE (Princeton)NRN1L
Genetics Home Reference (NIH)NRN1L
Genomic and cartography
GoldenPath hg19 (UCSC)NRN1L  -     chr16:67918781-67920271 +  16q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NRN1L  -     16q22.1   [Description]    (hg38-Dec_2013)
EnsemblNRN1L - 16q22.1 [CytoView hg19]  NRN1L - 16q22.1 [CytoView hg38]
Mapping of homologs : NCBINRN1L [Mapview hg19]  NRN1L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY358782 BC100863 BC100864 BC100865 BC100866
RefSeq transcript (Entrez)NM_198443
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)NRN1L
Cluster EST : UnigeneHs.435464 [ NCBI ]
CGAP (NCI)Hs.435464
Alternative Splicing GalleryENSG00000188038
Gene ExpressionNRN1L [ NCBI-GEO ]   NRN1L [ EBI - ARRAY_EXPRESS ]   NRN1L [ SEEK ]   NRN1L [ MEM ]
Gene Expression Viewer (FireBrowse)NRN1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)123904
GTEX Portal (Tissue expression)NRN1L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ496H8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ496H8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ496H8
Splice isoforms : SwissVarQ496H8
PhosPhoSitePlusQ496H8
Domains : Interpro (EBI)Neuritin_fam   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NRN1L
DMDM Disease mutations123904
Blocks (Seattle)NRN1L
SuperfamilyQ496H8
Human Protein AtlasENSG00000188038
Peptide AtlasQ496H8
HPRD18261
IPIIPI00056040   
Protein Interaction databases
DIP (DOE-UCLA)Q496H8
IntAct (EBI)Q496H8
FunCoupENSG00000188038
BioGRIDNRN1L
STRING (EMBL)NRN1L
ZODIACNRN1L
Ontologies - Pathways
QuickGOQ496H8
Ontology : AmiGOplasma membrane  nervous system development  anchored component of membrane  
Ontology : EGO-EBIplasma membrane  nervous system development  anchored component of membrane  
NDEx NetworkNRN1L
Atlas of Cancer Signalling NetworkNRN1L
Wikipedia pathwaysNRN1L
Orthology - Evolution
OrthoDB123904
GeneTree (enSembl)ENSG00000188038
Phylogenetic Trees/Animal Genes : TreeFamNRN1L
HOVERGENQ496H8
HOGENOMQ496H8
Homologs : HomoloGeneNRN1L
Homology/Alignments : Family Browser (UCSC)NRN1L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNRN1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NRN1L
dbVarNRN1L
ClinVarNRN1L
1000_GenomesNRN1L 
Exome Variant ServerNRN1L
ExAC (Exome Aggregation Consortium)NRN1L (select the gene name)
Genetic variants : HAPMAP123904
Genomic Variants (DGV)NRN1L [DGVbeta]
DECIPHER (Syndromes)16:67918781-67920271  ENSG00000188038
CONAN: Copy Number AnalysisNRN1L 
Mutations
ICGC Data PortalNRN1L 
TCGA Data PortalNRN1L 
Broad Tumor PortalNRN1L
OASIS PortalNRN1L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNRN1L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNRN1L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NRN1L
DgiDB (Drug Gene Interaction Database)NRN1L
DoCM (Curated mutations)NRN1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NRN1L (select a term)
intoGenNRN1L
Cancer3DNRN1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNRN1L
Genetic Testing Registry NRN1L
NextProtQ496H8 [Medical]
TSGene123904
GENETestsNRN1L
Huge Navigator NRN1L [HugePedia]
snp3D : Map Gene to Disease123904
BioCentury BCIQNRN1L
ClinGenNRN1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD123904
Chemical/Pharm GKB GenePA162398187
Clinical trialNRN1L
Miscellaneous
canSAR (ICR)NRN1L (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNRN1L
EVEXNRN1L
GoPubMedNRN1L
iHOPNRN1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:35:23 CET 2017

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