Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NSFP1 (N-ethylmaleimide-sensitive factor pseudogene 1)

Identity

Alias_namesNSFP
N-ethylmaleimide-sensitive factor pseudogene
Other alias
HGNC (Hugo) NSFP1
LocusID (NCBI) 728806
Atlas_Id 70984
Location 17q21.31  [Link to chromosome band 17q21]
Location_base_pair Starts at 44450179 and ends at 44500463 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
NSFP1 (17q21.31) / LRRC37A2 (17q21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NSFP1   31405
Cards
Entrez_Gene (NCBI)NSFP1  728806  N-ethylmaleimide-sensitive factor pseudogene 1
AliasesNSFP
GeneCards (Weizmann)NSFP1
Ensembl hg19 (Hinxton) [Gene_View]  chr17:44450179-44500463 [Contig_View]  NSFP1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:44450179-44500463 [Contig_View]  NSFP1 [Vega]
TCGA cBioPortalNSFP1
AceView (NCBI)NSFP1
Genatlas (Paris)NSFP1
WikiGenes728806
SOURCE (Princeton)NSFP1
Genetics Home Reference (NIH)NSFP1
Genomic and cartography
GoldenPath hg19 (UCSC)NSFP1  -     chr17:44450179-44500463 +  17q21.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NSFP1  -     17q21.31   [Description]    (hg38-Dec_2013)
EnsemblNSFP1 - 17q21.31 [CytoView hg19]  NSFP1 - 17q21.31 [CytoView hg38]
Mapping of homologs : NCBINSFP1 [Mapview hg19]  NSFP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA240782
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000017 NT_010783 NT_167251
Consensus coding sequences : CCDS (NCBI)NSFP1
Cluster EST : UnigeneHs.735097 [ NCBI ]
CGAP (NCI)Hs.735097
Gene ExpressionNSFP1 [ NCBI-GEO ]   NSFP1 [ EBI - ARRAY_EXPRESS ]   NSFP1 [ SEEK ]   NSFP1 [ MEM ]
Gene Expression Viewer (FireBrowse)NSFP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728806
GTEX Portal (Tissue expression)NSFP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NSFP1
DMDM Disease mutations728806
Blocks (Seattle)NSFP1
Protein Interaction databases
BioGRIDNSFP1
STRING (EMBL)NSFP1
ZODIACNSFP1
Ontologies - Pathways
Huge Navigator NSFP1 [HugePedia]
snp3D : Map Gene to Disease728806
BioCentury BCIQNSFP1
ClinGenNSFP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728806
Clinical trialNSFP1
Miscellaneous
canSAR (ICR)NSFP1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNSFP1
EVEXNSFP1
GoPubMedNSFP1
iHOPNSFP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:35:25 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.