Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NT5C1B-RDH14 (NT5C1B-RDH14 readthrough)

Identity

Other aliasAIRP
NT5C1B
cN-IB
cN1B
HGNC (Hugo) NT5C1B-RDH14
LocusID (NCBI) 100526794
Atlas_Id 70998
Location 2p24.2  [Link to chromosome band 2p24]
Location_base_pair Starts at 18554723 and ends at 18589580 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)NT5C1B-RDH14   38831
Cards
Entrez_Gene (NCBI)NT5C1B-RDH14  100526794  NT5C1B-RDH14 readthrough
AliasesAIRP; NT5C1B; cN-IB; cN1B
GeneCards (Weizmann)NT5C1B-RDH14
Ensembl hg19 (Hinxton)ENSG00000250741 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250741 [Gene_View]  ENSG00000250741 [Sequence]  chr2:18554723-18589580 [Contig_View]  NT5C1B-RDH14 [Vega]
ICGC DataPortalENSG00000250741
TCGA cBioPortalNT5C1B-RDH14
AceView (NCBI)NT5C1B-RDH14
Genatlas (Paris)NT5C1B-RDH14
WikiGenes100526794
SOURCE (Princeton)NT5C1B-RDH14
Genetics Home Reference (NIH)NT5C1B-RDH14
Genomic and cartography
GoldenPath hg38 (UCSC)NT5C1B-RDH14  -     chr2:18554723-18589580 -  2p24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NT5C1B-RDH14  -     2p24.2   [Description]    (hg19-Feb_2009)
GoldenPathNT5C1B-RDH14 - 2p24.2 [CytoView hg19]  NT5C1B-RDH14 - 2p24.2 [CytoView hg38]
ImmunoBaseENSG00000250741
Mapping of homologs : NCBINT5C1B-RDH14 [Mapview hg19]  NT5C1B-RDH14 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057444 AK307653
RefSeq transcript (Entrez)NM_001199103 NM_001199104
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NT5C1B-RDH14
Cluster EST : UnigeneHs.744358 [ NCBI ]
CGAP (NCI)Hs.744358
Alternative Splicing GalleryENSG00000250741
Gene ExpressionNT5C1B-RDH14 [ NCBI-GEO ]   NT5C1B-RDH14 [ EBI - ARRAY_EXPRESS ]   NT5C1B-RDH14 [ SEEK ]   NT5C1B-RDH14 [ MEM ]
Gene Expression Viewer (FireBrowse)NT5C1B-RDH14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100526794
GTEX Portal (Tissue expression)NT5C1B-RDH14
Human Protein AtlasENSG00000250741-NT5C1B-RDH14 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NT5C1B-RDH14
DMDM Disease mutations100526794
Blocks (Seattle)NT5C1B-RDH14
Human Protein Atlas [tissue]ENSG00000250741-NT5C1B-RDH14 [tissue]
IPIIPI00410375   
Protein Interaction databases
FunCoupENSG00000250741
BioGRIDNT5C1B-RDH14
STRING (EMBL)NT5C1B-RDH14
ZODIACNT5C1B-RDH14
Ontologies - Pathways
Huge Navigator NT5C1B-RDH14 [HugePedia]
snp3D : Map Gene to Disease100526794
BioCentury BCIQNT5C1B-RDH14
ClinGenNT5C1B-RDH14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100526794
Clinical trialNT5C1B-RDH14
Miscellaneous
canSAR (ICR)NT5C1B-RDH14 (select the gene name)
DataMed IndexNT5C1B-RDH14
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNT5C1B-RDH14
EVEXNT5C1B-RDH14
GoPubMedNT5C1B-RDH14
iHOPNT5C1B-RDH14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:58:14 CEST 2019
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.