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NT5C1B (5'-nucleotidase, cytosolic IB)

Identity

Alias_symbol (synonym)AIRP
CN-IB
Other aliasCN1B
HGNC (Hugo) NT5C1B
LocusID (NCBI) 93034
Atlas_Id 70997
Location 2p24.2  [Link to chromosome band 2p24]
Location_base_pair Starts at 18562871 and ends at 18589580 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NT5C1B   17818
Cards
Entrez_Gene (NCBI)NT5C1B  93034  5'-nucleotidase, cytosolic IB
AliasesAIRP; CN-IB; CN1B
GeneCards (Weizmann)NT5C1B
Ensembl hg19 (Hinxton)ENSG00000185013 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185013 [Gene_View]  chr2:18562871-18589580 [Contig_View]  NT5C1B [Vega]
ICGC DataPortalENSG00000185013
TCGA cBioPortalNT5C1B
AceView (NCBI)NT5C1B
Genatlas (Paris)NT5C1B
WikiGenes93034
SOURCE (Princeton)NT5C1B
Genetics Home Reference (NIH)NT5C1B
Genomic and cartography
GoldenPath hg38 (UCSC)NT5C1B  -     chr2:18562871-18589580 -  2p24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NT5C1B  -     2p24.2   [Description]    (hg19-Feb_2009)
EnsemblNT5C1B - 2p24.2 [CytoView hg19]  NT5C1B - 2p24.2 [CytoView hg38]
Mapping of homologs : NCBINT5C1B [Mapview hg19]  NT5C1B [Mapview hg38]
OMIM610526   
Gene and transcription
Genbank (Entrez)AA774429 AA974253 AF352326 AF356185 AF417165
RefSeq transcript (Entrez)NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_033253
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NT5C1B
Cluster EST : UnigeneHs.744358 [ NCBI ]
CGAP (NCI)Hs.744358
Alternative Splicing GalleryENSG00000185013
Gene ExpressionNT5C1B [ NCBI-GEO ]   NT5C1B [ EBI - ARRAY_EXPRESS ]   NT5C1B [ SEEK ]   NT5C1B [ MEM ]
Gene Expression Viewer (FireBrowse)NT5C1B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)93034
GTEX Portal (Tissue expression)NT5C1B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96P26   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96P26  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96P26
Splice isoforms : SwissVarQ96P26
Catalytic activity : Enzyme3.1.3.5 [ Enzyme-Expasy ]   3.1.3.53.1.3.5 [ IntEnz-EBI ]   3.1.3.5 [ BRENDA ]   3.1.3.5 [ KEGG ]   
PhosPhoSitePlusQ96P26
Domains : Interpro (EBI)5-nucleotidase   
Domain families : Pfam (Sanger)5-nucleotidase (PF06189)   
Domain families : Pfam (NCBI)pfam06189   
Conserved Domain (NCBI)NT5C1B
DMDM Disease mutations93034
Blocks (Seattle)NT5C1B
SuperfamilyQ96P26
Human Protein AtlasENSG00000185013
Peptide AtlasQ96P26
HPRD11405
IPIIPI00410373   IPI00169426   IPI00892609   IPI00910532   IPI00892769   IPI00981596   IPI00410374   
Protein Interaction databases
DIP (DOE-UCLA)Q96P26
IntAct (EBI)Q96P26
FunCoupENSG00000185013
BioGRIDNT5C1B
STRING (EMBL)NT5C1B
ZODIACNT5C1B
Ontologies - Pathways
QuickGOQ96P26
Ontology : AmiGOnucleotide binding  magnesium ion binding  nucleus  cytosol  purine nucleotide catabolic process  5'-nucleotidase activity  dephosphorylation  
Ontology : EGO-EBInucleotide binding  magnesium ion binding  nucleus  cytosol  purine nucleotide catabolic process  5'-nucleotidase activity  dephosphorylation  
Pathways : KEGGPurine metabolism    Pyrimidine metabolism    Nicotinate and nicotinamide metabolism   
NDEx NetworkNT5C1B
Atlas of Cancer Signalling NetworkNT5C1B
Wikipedia pathwaysNT5C1B
Orthology - Evolution
OrthoDB93034
GeneTree (enSembl)ENSG00000185013
Phylogenetic Trees/Animal Genes : TreeFamNT5C1B
HOVERGENQ96P26
HOGENOMQ96P26
Homologs : HomoloGeneNT5C1B
Homology/Alignments : Family Browser (UCSC)NT5C1B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNT5C1B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NT5C1B
dbVarNT5C1B
ClinVarNT5C1B
1000_GenomesNT5C1B 
Exome Variant ServerNT5C1B
ExAC (Exome Aggregation Consortium)NT5C1B (select the gene name)
Genetic variants : HAPMAP93034
Genomic Variants (DGV)NT5C1B [DGVbeta]
DECIPHERNT5C1B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNT5C1B 
Mutations
ICGC Data PortalNT5C1B 
TCGA Data PortalNT5C1B 
Broad Tumor PortalNT5C1B
OASIS PortalNT5C1B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNT5C1B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNT5C1B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NT5C1B
DgiDB (Drug Gene Interaction Database)NT5C1B
DoCM (Curated mutations)NT5C1B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NT5C1B (select a term)
intoGenNT5C1B
Cancer3DNT5C1B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610526   
Orphanet
MedgenNT5C1B
Genetic Testing Registry NT5C1B
NextProtQ96P26 [Medical]
TSGene93034
GENETestsNT5C1B
Target ValidationNT5C1B
Huge Navigator NT5C1B [HugePedia]
snp3D : Map Gene to Disease93034
BioCentury BCIQNT5C1B
ClinGenNT5C1B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD93034
Chemical/Pharm GKB GenePA31800
Clinical trialNT5C1B
Miscellaneous
canSAR (ICR)NT5C1B (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNT5C1B
EVEXNT5C1B
GoPubMedNT5C1B
iHOPNT5C1B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:33:10 CEST 2017

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