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NTAN1 (N-terminal asparagine amidase)

Identity

Other aliasPNAA
PNAD
HGNC (Hugo) NTAN1
LocusID (NCBI) 123803
Atlas_Id 54512
Location 16p13.11  [Link to chromosome band 16p13]
Location_base_pair Starts at 15131710 and ends at 15149936 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
NTAN1 (16p13.11) / SLC17A5 (6q13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Lung: Translocations in Squamous Cell Carcinoma


External links

Nomenclature
HGNC (Hugo)NTAN1   29909
Cards
Entrez_Gene (NCBI)NTAN1  123803  N-terminal asparagine amidase
AliasesPNAA; PNAD
GeneCards (Weizmann)NTAN1
Ensembl hg19 (Hinxton)ENSG00000157045 [Gene_View]  chr16:15131710-15149936 [Contig_View]  NTAN1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000157045 [Gene_View]  chr16:15131710-15149936 [Contig_View]  NTAN1 [Vega]
ICGC DataPortalENSG00000157045
TCGA cBioPortalNTAN1
AceView (NCBI)NTAN1
Genatlas (Paris)NTAN1
WikiGenes123803
SOURCE (Princeton)NTAN1
Genetics Home Reference (NIH)NTAN1
Genomic and cartography
GoldenPath hg19 (UCSC)NTAN1  -     chr16:15131710-15149936 -  16p13.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NTAN1  -     16p13.11   [Description]    (hg38-Dec_2013)
EnsemblNTAN1 - 16p13.11 [CytoView hg19]  NTAN1 - 16p13.11 [CytoView hg38]
Mapping of homologs : NCBINTAN1 [Mapview hg19]  NTAN1 [Mapview hg38]
OMIM615367   
Gene and transcription
Genbank (Entrez)AF092440 AK092915 BC017336 BF939373 DC383993
RefSeq transcript (Entrez)NM_001270766 NM_001270767 NM_173474
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010393 NT_187607 NW_004929400
Consensus coding sequences : CCDS (NCBI)NTAN1
Cluster EST : UnigeneHs.592045 [ NCBI ]
CGAP (NCI)Hs.592045
Alternative Splicing GalleryENSG00000157045
Gene ExpressionNTAN1 [ NCBI-GEO ]   NTAN1 [ EBI - ARRAY_EXPRESS ]   NTAN1 [ SEEK ]   NTAN1 [ MEM ]
Gene Expression Viewer (FireBrowse)NTAN1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)123803
GTEX Portal (Tissue expression)NTAN1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96AB6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96AB6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96AB6
Splice isoforms : SwissVarQ96AB6
Catalytic activity : Enzyme3.5.1.- [ Enzyme-Expasy ]   3.5.1.-3.5.1.- [ IntEnz-EBI ]   3.5.1.- [ BRENDA ]   3.5.1.- [ KEGG ]   
PhosPhoSitePlusQ96AB6
Domains : Interpro (EBI)NTAN1   
Domain families : Pfam (Sanger)N_Asn_amidohyd (PF14736)   
Domain families : Pfam (NCBI)pfam14736   
Conserved Domain (NCBI)NTAN1
DMDM Disease mutations123803
Blocks (Seattle)NTAN1
SuperfamilyQ96AB6
Human Protein AtlasENSG00000157045
Peptide AtlasQ96AB6
HPRD17649
IPIIPI00470626   
Protein Interaction databases
DIP (DOE-UCLA)Q96AB6
IntAct (EBI)Q96AB6
FunCoupENSG00000157045
BioGRIDNTAN1
STRING (EMBL)NTAN1
ZODIACNTAN1
Ontologies - Pathways
QuickGOQ96AB6
Ontology : AmiGOnucleus  cytoplasm  memory  metabolic process  adult locomotory behavior  protein-N-terminal asparagine amidohydrolase activity  
Ontology : EGO-EBInucleus  cytoplasm  memory  metabolic process  adult locomotory behavior  protein-N-terminal asparagine amidohydrolase activity  
NDEx NetworkNTAN1
Atlas of Cancer Signalling NetworkNTAN1
Wikipedia pathwaysNTAN1
Orthology - Evolution
OrthoDB123803
GeneTree (enSembl)ENSG00000157045
Phylogenetic Trees/Animal Genes : TreeFamNTAN1
HOVERGENQ96AB6
HOGENOMQ96AB6
Homologs : HomoloGeneNTAN1
Homology/Alignments : Family Browser (UCSC)NTAN1
Gene fusions - Rearrangements
Fusion : MitelmanNTAN1/SLC17A5 [16p13.11/6q13]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNTAN1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NTAN1
dbVarNTAN1
ClinVarNTAN1
1000_GenomesNTAN1 
Exome Variant ServerNTAN1
ExAC (Exome Aggregation Consortium)NTAN1 (select the gene name)
Genetic variants : HAPMAP123803
Genomic Variants (DGV)NTAN1 [DGVbeta]
DECIPHER (Syndromes)16:15131710-15149936  ENSG00000157045
CONAN: Copy Number AnalysisNTAN1 
Mutations
ICGC Data PortalNTAN1 
TCGA Data PortalNTAN1 
Broad Tumor PortalNTAN1
OASIS PortalNTAN1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNTAN1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNTAN1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NTAN1
DgiDB (Drug Gene Interaction Database)NTAN1
DoCM (Curated mutations)NTAN1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NTAN1 (select a term)
intoGenNTAN1
Cancer3DNTAN1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615367   
Orphanet
MedgenNTAN1
Genetic Testing Registry NTAN1
NextProtQ96AB6 [Medical]
TSGene123803
GENETestsNTAN1
Huge Navigator NTAN1 [HugePedia]
snp3D : Map Gene to Disease123803
BioCentury BCIQNTAN1
ClinGenNTAN1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD123803
Chemical/Pharm GKB GenePA134863573
Clinical trialNTAN1
Miscellaneous
canSAR (ICR)NTAN1 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNTAN1
EVEXNTAN1
GoPubMedNTAN1
iHOPNTAN1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:19:29 CET 2017

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