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NTM-IT (NTM intronic transcript)

Identity

Alias_namesNTM-IT3
NTM intronic transcript 3 (non-protein coding)
NTM intronic transcript (non-protein coding)
Other alias
HGNC (Hugo) NTM-IT
LocusID (NCBI) 100874281
Atlas_Id 71004
Location 11q25  [Link to chromosome band 11q25]
Location_base_pair Starts at 132284302 and ends at 132288459 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NTM-IT   41437
Cards
Entrez_Gene (NCBI)NTM-IT  100874281  NTM intronic transcript
AliasesNTM-IT3
GeneCards (Weizmann)NTM-IT
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:132284302-132288459 [Contig_View]  NTM-IT [Vega]
TCGA cBioPortalNTM-IT
AceView (NCBI)NTM-IT
Genatlas (Paris)NTM-IT
WikiGenes100874281
SOURCE (Princeton)NTM-IT
Genetics Home Reference (NIH)NTM-IT
Genomic and cartography
GoldenPath hg38 (UCSC)NTM-IT  -     chr11:132284302-132288459 +  11q25   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NTM-IT  -     11q25   [Description]    (hg19-Feb_2009)
EnsemblNTM-IT - 11q25 [CytoView hg19]  NTM-IT - 11q25 [CytoView hg38]
Mapping of homologs : NCBINTM-IT [Mapview hg19]  NTM-IT [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA435898
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NTM-IT
Gene ExpressionNTM-IT [ NCBI-GEO ]   NTM-IT [ EBI - ARRAY_EXPRESS ]   NTM-IT [ SEEK ]   NTM-IT [ MEM ]
Gene Expression Viewer (FireBrowse)NTM-IT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874281
GTEX Portal (Tissue expression)NTM-IT
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NTM-IT
DMDM Disease mutations100874281
Blocks (Seattle)NTM-IT
Protein Interaction databases
BioGRIDNTM-IT
STRING (EMBL)NTM-IT
ZODIACNTM-IT
Ontologies - Pathways
Huge Navigator NTM-IT [HugePedia]
snp3D : Map Gene to Disease100874281
BioCentury BCIQNTM-IT
ClinGenNTM-IT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874281
Clinical trialNTM-IT
Miscellaneous
canSAR (ICR)NTM-IT (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineNTM-IT
EVEXNTM-IT
GoPubMedNTM-IT
iHOPNTM-IT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:19:30 CET 2017

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For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.