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NTPCR (nucleoside-triphosphatase, cancer-related)

Identity

Alias (NCBI)C1orf57
HCR-NTPase
THEP1
HGNC (Hugo) NTPCR
HGNC Alias symbMGC13186
HCR-NTPase
THEP1
HGNC Alias namehuman cancer-related NTPase
HGNC Previous nameC1orf57
HGNC Previous namechromosome 1 open reading frame 57
LocusID (NCBI) 84284
Atlas_Id 51970
Location 1q42.2  [Link to chromosome band 1q42]
Location_base_pair Starts at 232950611 and ends at 232983882 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ARID4B (1q42.3) / NTPCR (1q42.2)NTPCR (1q42.2) / ITGA9 (3p22.2)NTPCR (1q42.2) / THAP4 (2q37.3)
PRG2 (11q12.1) / NTPCR (1q42.2)PRIMA1 (14q32.12) / NTPCR (1q42.2)ARID4B 1q42.3 / NTPCR 1q42.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)NTPCR   28204
Cards
Entrez_Gene (NCBI)NTPCR    nucleoside-triphosphatase, cancer-related
AliasesC1orf57; HCR-NTPase; THEP1
GeneCards (Weizmann)NTPCR
Ensembl hg19 (Hinxton)ENSG00000135778 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135778 [Gene_View]  ENSG00000135778 [Sequence]  chr1:232950611-232983882 [Contig_View]  NTPCR [Vega]
ICGC DataPortalENSG00000135778
TCGA cBioPortalNTPCR
AceView (NCBI)NTPCR
Genatlas (Paris)NTPCR
SOURCE (Princeton)NTPCR
Genetics Home Reference (NIH)NTPCR
Genomic and cartography
GoldenPath hg38 (UCSC)NTPCR  -     chr1:232950611-232983882 +  1q42.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NTPCR  -     1q42.2   [Description]    (hg19-Feb_2009)
GoldenPathNTPCR - 1q42.2 [CytoView hg19]  NTPCR - 1q42.2 [CytoView hg38]
ImmunoBaseENSG00000135778
Genome Data Viewer NCBINTPCR [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA635564 AF416713 AK311229 AK316591 BC005102
RefSeq transcript (Entrez)NM_001329452 NM_001329453 NM_032324
Consensus coding sequences : CCDS (NCBI)NTPCR
Gene ExpressionNTPCR [ NCBI-GEO ]   NTPCR [ EBI - ARRAY_EXPRESS ]   NTPCR [ SEEK ]   NTPCR [ MEM ]
Gene Expression Viewer (FireBrowse)NTPCR [ Firebrowse - Broad ]
GenevisibleExpression of NTPCR in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84284
GTEX Portal (Tissue expression)NTPCR
Human Protein AtlasENSG00000135778-NTPCR [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BSD7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BSD7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BSD7
Catalytic activity : Enzyme3.6.1.15 [ Enzyme-Expasy ]   3.6.1.153.6.1.15 [ IntEnz-EBI ]   3.6.1.15 [ BRENDA ]   3.6.1.15 [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ9BSD7
Domains : Interpro (EBI)AAA+_ATPase    Nuc-triphosphatase_THEP1    P-loop_NTPase   
Domain families : Pfam (Sanger)NTPase_1 (PF03266)   
Domain families : Pfam (NCBI)pfam03266   
Domain families : Smart (EMBL)AAA (SM00382)  
Conserved Domain (NCBI)NTPCR
PDB (RSDB)2I3B   
PDB Europe2I3B   
PDB (PDBSum)2I3B   
PDB (IMB)2I3B   
Structural Biology KnowledgeBase2I3B   
SCOP (Structural Classification of Proteins)2I3B   
CATH (Classification of proteins structures)2I3B   
SuperfamilyQ9BSD7
AlphaFold pdb e-kbQ9BSD7   
Human Protein Atlas [tissue]ENSG00000135778-NTPCR [tissue]
HPRD17486
Protein Interaction databases
DIP (DOE-UCLA)Q9BSD7
IntAct (EBI)Q9BSD7
BioGRIDNTPCR
STRING (EMBL)NTPCR
ZODIACNTPCR
Ontologies - Pathways
QuickGOQ9BSD7
Ontology : AmiGORNA binding  ATP binding  membrane  nucleoside-triphosphatase activity  
Ontology : EGO-EBIRNA binding  ATP binding  membrane  nucleoside-triphosphatase activity  
Pathways : KEGGPurine metabolism    Thiamine metabolism   
NDEx NetworkNTPCR
Atlas of Cancer Signalling NetworkNTPCR
Wikipedia pathwaysNTPCR
Orthology - Evolution
OrthoDB84284
GeneTree (enSembl)ENSG00000135778
Phylogenetic Trees/Animal Genes : TreeFamNTPCR
Homologs : HomoloGeneNTPCR
Homology/Alignments : Family Browser (UCSC)NTPCR
Gene fusions - Rearrangements
Fusion : MitelmanARID4B/NTPCR [1q42.3/1q42.2]  
Fusion : QuiverNTPCR
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNTPCR [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NTPCR
dbVarNTPCR
ClinVarNTPCR
MonarchNTPCR
1000_GenomesNTPCR 
Exome Variant ServerNTPCR
GNOMAD BrowserENSG00000135778
Varsome BrowserNTPCR
ACMGNTPCR variants
VarityQ9BSD7
Genomic Variants (DGV)NTPCR [DGVbeta]
DECIPHERNTPCR [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNTPCR 
Mutations
ICGC Data PortalNTPCR 
TCGA Data PortalNTPCR 
Broad Tumor PortalNTPCR
OASIS PortalNTPCR [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNTPCR  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DNTPCR
Mutations and Diseases : HGMDNTPCR
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaNTPCR
DgiDB (Drug Gene Interaction Database)NTPCR
DoCM (Curated mutations)NTPCR
CIViC (Clinical Interpretations of Variants in Cancer)NTPCR
Cancer3DNTPCR
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETNTPCR
MedgenNTPCR
Genetic Testing Registry NTPCR
NextProtQ9BSD7 [Medical]
GENETestsNTPCR
Target ValidationNTPCR
Huge Navigator NTPCR [HugePedia]
ClinGenNTPCR
Clinical trials, drugs, therapy
MyCancerGenomeNTPCR
Protein Interactions : CTDNTPCR
Pharm GKB GenePA142672508
PharosQ9BSD7
Clinical trialNTPCR
Miscellaneous
canSAR (ICR)NTPCR
HarmonizomeNTPCR
DataMed IndexNTPCR
Probes
Litterature
PubMed55 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNTPCR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:23:26 CEST 2021

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