Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NTSR2 (neurotensin receptor 2)

Identity

Alias_symbol (synonym)NTR2
Other alias
HGNC (Hugo) NTSR2
LocusID (NCBI) 23620
Atlas_Id 51345
Location 2p25.1  [Link to chromosome band 2p25]
Location_base_pair Starts at 11658178 and ends at 11670203 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ROCK2 (2p25.1) / NTSR2 (2p25.1)ROCK2 2p25.1 / NTSR2 2p25.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NTSR2   8040
Cards
Entrez_Gene (NCBI)NTSR2  23620  neurotensin receptor 2
AliasesNTR2
GeneCards (Weizmann)NTSR2
Ensembl hg19 (Hinxton)ENSG00000169006 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169006 [Gene_View]  chr2:11658178-11670203 [Contig_View]  NTSR2 [Vega]
ICGC DataPortalENSG00000169006
TCGA cBioPortalNTSR2
AceView (NCBI)NTSR2
Genatlas (Paris)NTSR2
WikiGenes23620
SOURCE (Princeton)NTSR2
Genetics Home Reference (NIH)NTSR2
Genomic and cartography
GoldenPath hg38 (UCSC)NTSR2  -     chr2:11658178-11670203 -  2p25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NTSR2  -     2p25.1   [Description]    (hg19-Feb_2009)
EnsemblNTSR2 - 2p25.1 [CytoView hg19]  NTSR2 - 2p25.1 [CytoView hg38]
Mapping of homologs : NCBINTSR2 [Mapview hg19]  NTSR2 [Mapview hg38]
OMIM605538   
Gene and transcription
Genbank (Entrez)AY429107 BC022501 BC037776 BI758259 DQ893289
RefSeq transcript (Entrez)NM_012344
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NTSR2
Cluster EST : UnigeneHs.131138 [ NCBI ]
CGAP (NCI)Hs.131138
Alternative Splicing GalleryENSG00000169006
Gene ExpressionNTSR2 [ NCBI-GEO ]   NTSR2 [ EBI - ARRAY_EXPRESS ]   NTSR2 [ SEEK ]   NTSR2 [ MEM ]
Gene Expression Viewer (FireBrowse)NTSR2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23620
GTEX Portal (Tissue expression)NTSR2
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95665   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95665  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95665
Splice isoforms : SwissVarO95665
PhosPhoSitePlusO95665
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    NT2_rcpt    NT_rcpt   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)NTSR2
DMDM Disease mutations23620
Blocks (Seattle)NTSR2
SuperfamilyO95665
Human Protein AtlasENSG00000169006
Peptide AtlasO95665
HPRD05704
IPIIPI00032116   
Protein Interaction databases
DIP (DOE-UCLA)O95665
IntAct (EBI)O95665
FunCoupENSG00000169006
BioGRIDNTSR2
STRING (EMBL)NTSR2
ZODIACNTSR2
Ontologies - Pathways
QuickGOO95665
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  integral component of plasma membrane  cell surface receptor signaling pathway  phospholipase C-activating G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  sensory perception  G-protein coupled neurotensin receptor activity  regulation of membrane potential  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  integral component of plasma membrane  cell surface receptor signaling pathway  phospholipase C-activating G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  sensory perception  G-protein coupled neurotensin receptor activity  regulation of membrane potential  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkNTSR2
Atlas of Cancer Signalling NetworkNTSR2
Wikipedia pathwaysNTSR2
Orthology - Evolution
OrthoDB23620
GeneTree (enSembl)ENSG00000169006
Phylogenetic Trees/Animal Genes : TreeFamNTSR2
HOVERGENO95665
HOGENOMO95665
Homologs : HomoloGeneNTSR2
Homology/Alignments : Family Browser (UCSC)NTSR2
Gene fusions - Rearrangements
Fusion : MitelmanROCK2/NTSR2 [2p25.1/2p25.1]  [t(2;2)(p25;p25)]  
Fusion: TCGAROCK2 2p25.1 NTSR2 2p25.1 PRAD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNTSR2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NTSR2
dbVarNTSR2
ClinVarNTSR2
1000_GenomesNTSR2 
Exome Variant ServerNTSR2
ExAC (Exome Aggregation Consortium)NTSR2 (select the gene name)
Genetic variants : HAPMAP23620
Genomic Variants (DGV)NTSR2 [DGVbeta]
DECIPHERNTSR2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNTSR2 
Mutations
ICGC Data PortalNTSR2 
TCGA Data PortalNTSR2 
Broad Tumor PortalNTSR2
OASIS PortalNTSR2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNTSR2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNTSR2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NTSR2
DgiDB (Drug Gene Interaction Database)NTSR2
DoCM (Curated mutations)NTSR2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NTSR2 (select a term)
intoGenNTSR2
Cancer3DNTSR2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605538   
Orphanet
MedgenNTSR2
Genetic Testing Registry NTSR2
NextProtO95665 [Medical]
TSGene23620
GENETestsNTSR2
Target ValidationNTSR2
Huge Navigator NTSR2 [HugePedia]
snp3D : Map Gene to Disease23620
BioCentury BCIQNTSR2
ClinGenNTSR2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23620
Chemical/Pharm GKB GenePA31822
Clinical trialNTSR2
Miscellaneous
canSAR (ICR)NTSR2 (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNTSR2
EVEXNTSR2
GoPubMedNTSR2
iHOPNTSR2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 17:09:32 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.