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NUDC (nuclear distribution C, dynein complex regulator)

Identity

Alias_namesnuclear distribution gene C homolog (A. nidulans)
nuclear distribution C homolog (A. nidulans)
nudC nuclear distribution protein
Alias_symbol (synonym)NudC
Other aliasHNUDC
MNUDC
NPD011
HGNC (Hugo) NUDC
LocusID (NCBI) 10726
Atlas_Id 46349
Location 1p36.11  [Link to chromosome band 1p36]
Location_base_pair Starts at 26921722 and ends at 26946871 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
NUDC (1p36.11) / PEF1 (1p35.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NUDC   8045
Cards
Entrez_Gene (NCBI)NUDC  10726  nuclear distribution C, dynein complex regulator
AliasesHNUDC; MNUDC; NPD011
GeneCards (Weizmann)NUDC
Ensembl hg19 (Hinxton)ENSG00000090273 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000090273 [Gene_View]  chr1:26921722-26946871 [Contig_View]  NUDC [Vega]
ICGC DataPortalENSG00000090273
TCGA cBioPortalNUDC
AceView (NCBI)NUDC
Genatlas (Paris)NUDC
WikiGenes10726
SOURCE (Princeton)NUDC
Genetics Home Reference (NIH)NUDC
Genomic and cartography
GoldenPath hg38 (UCSC)NUDC  -     chr1:26921722-26946871 +  1p36.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NUDC  -     1p36.11   [Description]    (hg19-Feb_2009)
EnsemblNUDC - 1p36.11 [CytoView hg19]  NUDC - 1p36.11 [CytoView hg38]
Mapping of homologs : NCBINUDC [Mapview hg19]  NUDC [Mapview hg38]
OMIM610325   
Gene and transcription
Genbank (Entrez)AB019408 AF086922 AF100760 AF125465 AF130736
RefSeq transcript (Entrez)NM_006600
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NUDC
Cluster EST : UnigeneHs.263812 [ NCBI ]
CGAP (NCI)Hs.263812
Alternative Splicing GalleryENSG00000090273
Gene ExpressionNUDC [ NCBI-GEO ]   NUDC [ EBI - ARRAY_EXPRESS ]   NUDC [ SEEK ]   NUDC [ MEM ]
Gene Expression Viewer (FireBrowse)NUDC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10726
GTEX Portal (Tissue expression)NUDC
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y266   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y266  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y266
Splice isoforms : SwissVarQ9Y266
PhosPhoSitePlusQ9Y266
Domaine pattern : Prosite (Expaxy)CS (PS51203)   
Domains : Interpro (EBI)CS_dom    HSP20-like_chaperone    NuDC    NudC_N_dom   
Domain families : Pfam (Sanger)CS (PF04969)    NuDC (PF16273)    Nudc_N (PF14050)   
Domain families : Pfam (NCBI)pfam04969    pfam16273    pfam14050   
Conserved Domain (NCBI)NUDC
DMDM Disease mutations10726
Blocks (Seattle)NUDC
PDB (SRS)3QOR   
PDB (PDBSum)3QOR   
PDB (IMB)3QOR   
PDB (RSDB)3QOR   
Structural Biology KnowledgeBase3QOR   
SCOP (Structural Classification of Proteins)3QOR   
CATH (Classification of proteins structures)3QOR   
SuperfamilyQ9Y266
Human Protein AtlasENSG00000090273
Peptide AtlasQ9Y266
HPRD10122
IPIIPI00550746   IPI00647418   IPI00646767   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y266
IntAct (EBI)Q9Y266
FunCoupENSG00000090273
BioGRIDNUDC
STRING (EMBL)NUDC
ZODIACNUDC
Ontologies - Pathways
QuickGOQ9Y266
Ontology : AmiGOprotein binding  nucleoplasm  cytoplasm  cytosol  microtubule  protein folding  sister chromatid cohesion  multicellular organism development  cell proliferation  cadherin binding  unfolded protein binding  cell division  
Ontology : EGO-EBIprotein binding  nucleoplasm  cytoplasm  cytosol  microtubule  protein folding  sister chromatid cohesion  multicellular organism development  cell proliferation  cadherin binding  unfolded protein binding  cell division  
NDEx NetworkNUDC
Atlas of Cancer Signalling NetworkNUDC
Wikipedia pathwaysNUDC
Orthology - Evolution
OrthoDB10726
GeneTree (enSembl)ENSG00000090273
Phylogenetic Trees/Animal Genes : TreeFamNUDC
HOVERGENQ9Y266
HOGENOMQ9Y266
Homologs : HomoloGeneNUDC
Homology/Alignments : Family Browser (UCSC)NUDC
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNUDC [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NUDC
dbVarNUDC
ClinVarNUDC
1000_GenomesNUDC 
Exome Variant ServerNUDC
ExAC (Exome Aggregation Consortium)NUDC (select the gene name)
Genetic variants : HAPMAP10726
Genomic Variants (DGV)NUDC [DGVbeta]
DECIPHERNUDC [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNUDC 
Mutations
ICGC Data PortalNUDC 
TCGA Data PortalNUDC 
Broad Tumor PortalNUDC
OASIS PortalNUDC [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNUDC  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNUDC
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NUDC
DgiDB (Drug Gene Interaction Database)NUDC
DoCM (Curated mutations)NUDC (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NUDC (select a term)
intoGenNUDC
Cancer3DNUDC(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610325   
Orphanet
MedgenNUDC
Genetic Testing Registry NUDC
NextProtQ9Y266 [Medical]
TSGene10726
GENETestsNUDC
Target ValidationNUDC
Huge Navigator NUDC [HugePedia]
snp3D : Map Gene to Disease10726
BioCentury BCIQNUDC
ClinGenNUDC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10726
Chemical/Pharm GKB GenePA31827
Clinical trialNUDC
Miscellaneous
canSAR (ICR)NUDC (select the gene name)
Probes
Litterature
PubMed68 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUDC
EVEXNUDC
GoPubMedNUDC
iHOPNUDC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:22:53 CEST 2017

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