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NUDT11 (nudix hydrolase 11)

Identity

Alias_namesnudix (nucleoside diphosphate linked moiety X)-type motif 11
Alias_symbol (synonym)DIPP3b
FLJ10628
hDIPP3beta
Other aliasAPS1
ASP1
DIPP3beta
HGNC (Hugo) NUDT11
LocusID (NCBI) 55190
Atlas_Id 41591
Location Xp11.22  [Link to chromosome band Xp11]
Location_base_pair Starts at 51490011 and ends at 51496607 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Prostate tumors: an overview


External links

Nomenclature
HGNC (Hugo)NUDT11   18011
Cards
Entrez_Gene (NCBI)NUDT11  55190  nudix hydrolase 11
AliasesAPS1; ASP1; DIPP3b; DIPP3beta; 
hDIPP3beta
GeneCards (Weizmann)NUDT11
Ensembl hg19 (Hinxton)ENSG00000196368 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196368 [Gene_View]  chrX:51490011-51496607 [Contig_View]  NUDT11 [Vega]
ICGC DataPortalENSG00000196368
TCGA cBioPortalNUDT11
AceView (NCBI)NUDT11
Genatlas (Paris)NUDT11
WikiGenes55190
SOURCE (Princeton)NUDT11
Genetics Home Reference (NIH)NUDT11
Genomic and cartography
GoldenPath hg38 (UCSC)NUDT11  -     chrX:51490011-51496607 -  Xp11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NUDT11  -     Xp11.22   [Description]    (hg19-Feb_2009)
EnsemblNUDT11 - Xp11.22 [CytoView hg19]  NUDT11 - Xp11.22 [CytoView hg38]
Mapping of homologs : NCBINUDT11 [Mapview hg19]  NUDT11 [Mapview hg38]
OMIM300528   
Gene and transcription
Genbank (Entrez)AK001490 AM392606 BC009942 BX419815
RefSeq transcript (Entrez)NM_018159
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NUDT11
Cluster EST : UnigeneHs.200016 [ NCBI ]
CGAP (NCI)Hs.200016
Alternative Splicing GalleryENSG00000196368
Gene ExpressionNUDT11 [ NCBI-GEO ]   NUDT11 [ EBI - ARRAY_EXPRESS ]   NUDT11 [ SEEK ]   NUDT11 [ MEM ]
Gene Expression Viewer (FireBrowse)NUDT11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55190
GTEX Portal (Tissue expression)NUDT11
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96G61   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96G61  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96G61
Splice isoforms : SwissVarQ96G61
PhosPhoSitePlusQ96G61
Domaine pattern : Prosite (Expaxy)NUDIX (PS51462)    NUDIX_BOX (PS00893)   
Domains : Interpro (EBI)NUDIX_hydrolase_CS    NUDIX_hydrolase_dom    NUDIX_hydrolase_dom-like   
Domain families : Pfam (Sanger)NUDIX (PF00293)   
Domain families : Pfam (NCBI)pfam00293   
Conserved Domain (NCBI)NUDT11
DMDM Disease mutations55190
Blocks (Seattle)NUDT11
SuperfamilyQ96G61
Human Protein AtlasENSG00000196368
Peptide AtlasQ96G61
HPRD06667
IPIIPI00305384   
Protein Interaction databases
DIP (DOE-UCLA)Q96G61
IntAct (EBI)Q96G61
FunCoupENSG00000196368
BioGRIDNUDT11
STRING (EMBL)NUDT11
ZODIACNUDT11
Ontologies - Pathways
QuickGOQ96G61
Ontology : AmiGOendopolyphosphatase activity  intracellular  nucleus  cytoplasm  cytosol  cytosol  diphosphoinositol-polyphosphate diphosphatase activity  diphosphoinositol-polyphosphate diphosphatase activity  bis(5'-adenosyl)-hexaphosphatase activity  bis(5'-adenosyl)-pentaphosphatase activity  inositol phosphate metabolic process  metal ion binding  m7G(5')pppN diphosphatase activity  inositol diphosphate tetrakisphosphate diphosphatase activity  inositol bisdiphosphate tetrakisphosphate diphosphatase activity  inositol diphosphate pentakisphosphate diphosphatase activity  inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity  inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity  inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity  inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity  inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity  inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity  diphosphoinositol polyphosphate metabolic process  diadenosine pentaphosphate catabolic process  diadenosine hexaphosphate catabolic process  adenosine 5'-(hexahydrogen pentaphosphate) catabolic process  
Ontology : EGO-EBIendopolyphosphatase activity  intracellular  nucleus  cytoplasm  cytosol  cytosol  diphosphoinositol-polyphosphate diphosphatase activity  diphosphoinositol-polyphosphate diphosphatase activity  bis(5'-adenosyl)-hexaphosphatase activity  bis(5'-adenosyl)-pentaphosphatase activity  inositol phosphate metabolic process  metal ion binding  m7G(5')pppN diphosphatase activity  inositol diphosphate tetrakisphosphate diphosphatase activity  inositol bisdiphosphate tetrakisphosphate diphosphatase activity  inositol diphosphate pentakisphosphate diphosphatase activity  inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity  inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity  inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity  inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity  inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity  inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity  diphosphoinositol polyphosphate metabolic process  diadenosine pentaphosphate catabolic process  diadenosine hexaphosphate catabolic process  adenosine 5'-(hexahydrogen pentaphosphate) catabolic process  
NDEx NetworkNUDT11
Atlas of Cancer Signalling NetworkNUDT11
Wikipedia pathwaysNUDT11
Orthology - Evolution
OrthoDB55190
GeneTree (enSembl)ENSG00000196368
Phylogenetic Trees/Animal Genes : TreeFamNUDT11
HOVERGENQ96G61
HOGENOMQ96G61
Homologs : HomoloGeneNUDT11
Homology/Alignments : Family Browser (UCSC)NUDT11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNUDT11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NUDT11
dbVarNUDT11
ClinVarNUDT11
1000_GenomesNUDT11 
Exome Variant ServerNUDT11
ExAC (Exome Aggregation Consortium)NUDT11 (select the gene name)
Genetic variants : HAPMAP55190
Genomic Variants (DGV)NUDT11 [DGVbeta]
DECIPHERNUDT11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNUDT11 
Mutations
ICGC Data PortalNUDT11 
TCGA Data PortalNUDT11 
Broad Tumor PortalNUDT11
OASIS PortalNUDT11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNUDT11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNUDT11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NUDT11
DgiDB (Drug Gene Interaction Database)NUDT11
DoCM (Curated mutations)NUDT11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NUDT11 (select a term)
intoGenNUDT11
Cancer3DNUDT11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300528   
Orphanet
MedgenNUDT11
Genetic Testing Registry NUDT11
NextProtQ96G61 [Medical]
TSGene55190
GENETestsNUDT11
Target ValidationNUDT11
Huge Navigator NUDT11 [HugePedia]
snp3D : Map Gene to Disease55190
BioCentury BCIQNUDT11
ClinGenNUDT11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55190
Chemical/Pharm GKB GenePA31832
Clinical trialNUDT11
Miscellaneous
canSAR (ICR)NUDT11 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUDT11
EVEXNUDT11
GoPubMedNUDT11
iHOPNUDT11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:47:38 CEST 2017

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