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NUDT16L1 (nudix hydrolase 16 like 1)

Identity

Alias_namesnudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1
Alias_symbol (synonym)SDOS
TIRR
Other alias
HGNC (Hugo) NUDT16L1
LocusID (NCBI) 84309
Atlas_Id 56734
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 4693693 and ends at 4695859 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NUDT16L1 (16p13.3) / FAHD1 (16p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]

Solid Tumors TT_t1616p13p13ID102130


External links

Nomenclature
HGNC (Hugo)NUDT16L1   28154
Cards
Entrez_Gene (NCBI)NUDT16L1  84309  nudix hydrolase 16 like 1
AliasesSDOS; TIRR
GeneCards (Weizmann)NUDT16L1
Ensembl hg19 (Hinxton)ENSG00000168101 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168101 [Gene_View]  ENSG00000168101 [Sequence]  chr16:4693693-4695859 [Contig_View]  NUDT16L1 [Vega]
ICGC DataPortalENSG00000168101
TCGA cBioPortalNUDT16L1
AceView (NCBI)NUDT16L1
Genatlas (Paris)NUDT16L1
WikiGenes84309
SOURCE (Princeton)NUDT16L1
Genetics Home Reference (NIH)NUDT16L1
Genomic and cartography
GoldenPath hg38 (UCSC)NUDT16L1  -     chr16:4693693-4695859 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NUDT16L1  -     16p13.3   [Description]    (hg19-Feb_2009)
GoldenPathNUDT16L1 - 16p13.3 [CytoView hg19]  NUDT16L1 - 16p13.3 [CytoView hg38]
ImmunoBaseENSG00000168101
Mapping of homologs : NCBINUDT16L1 [Mapview hg19]  NUDT16L1 [Mapview hg38]
OMIM617338   
Gene and transcription
Genbank (Entrez)AK092642 AK315456 BC006223 BQ923183 BU739233
RefSeq transcript (Entrez)NM_001193452 NM_001370585 NM_001370586 NM_001370587 NM_001370588 NM_032349
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NUDT16L1
Alternative Splicing GalleryENSG00000168101
Gene ExpressionNUDT16L1 [ NCBI-GEO ]   NUDT16L1 [ EBI - ARRAY_EXPRESS ]   NUDT16L1 [ SEEK ]   NUDT16L1 [ MEM ]
Gene Expression Viewer (FireBrowse)NUDT16L1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)84309
GTEX Portal (Tissue expression)NUDT16L1
Human Protein AtlasENSG00000168101-NUDT16L1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NUDT16L1
DMDM Disease mutations84309
Blocks (Seattle)NUDT16L1
Human Protein Atlas [tissue]ENSG00000168101-NUDT16L1 [tissue]
IPIIPI00031650   IPI00168009   
Protein Interaction databases
FunCoupENSG00000168101
BioGRIDNUDT16L1
STRING (EMBL)NUDT16L1
ZODIACNUDT16L1
Ontologies - Pathways
Huge Navigator NUDT16L1 [HugePedia]
snp3D : Map Gene to Disease84309
BioCentury BCIQNUDT16L1
ClinGenNUDT16L1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84309
Chemical/Pharm GKB GenePA134977238
Clinical trialNUDT16L1
Miscellaneous
canSAR (ICR)NUDT16L1 (select the gene name)
DataMed IndexNUDT16L1
Probes
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUDT16L1
EVEXNUDT16L1
GoPubMedNUDT16L1
iHOPNUDT16L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 16:59:52 CET 2020

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