Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NUDT16P1 (nudix hydrolase 16 pseudogene 1)

Identity

Alias_namesNUDT16P
nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene
nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1
Alias_symbol (synonym)FLJ20525
Other alias
HGNC (Hugo) NUDT16P1
LocusID (NCBI) 152195
Atlas_Id 71021
Location 3q22.1  [Link to chromosome band 3q22]
Location_base_pair Starts at 131361894 and ends at 131365122 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NUDT16P1   27189
Cards
Entrez_Gene (NCBI)NUDT16P1  152195  nudix hydrolase 16 pseudogene 1
AliasesNUDT16P
GeneCards (Weizmann)NUDT16P1
Ensembl hg19 (Hinxton)ENSG00000246082 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000246082 [Gene_View]  chr3:131361894-131365122 [Contig_View]  NUDT16P1 [Vega]
ICGC DataPortalENSG00000246082
TCGA cBioPortalNUDT16P1
AceView (NCBI)NUDT16P1
Genatlas (Paris)NUDT16P1
WikiGenes152195
SOURCE (Princeton)NUDT16P1
Genetics Home Reference (NIH)NUDT16P1
Genomic and cartography
GoldenPath hg38 (UCSC)NUDT16P1  -     chr3:131361894-131365122 +  3q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NUDT16P1  -     3q22.1   [Description]    (hg19-Feb_2009)
EnsemblNUDT16P1 - 3q22.1 [CytoView hg19]  NUDT16P1 - 3q22.1 [CytoView hg38]
Mapping of homologs : NCBINUDT16P1 [Mapview hg19]  NUDT16P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK000532 AK297126 BC015593 DA541046
RefSeq transcript (Entrez)NM_194289
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NUDT16P1
Cluster EST : UnigeneHs.380350 [ NCBI ]
CGAP (NCI)Hs.380350
Alternative Splicing GalleryENSG00000246082
Gene ExpressionNUDT16P1 [ NCBI-GEO ]   NUDT16P1 [ EBI - ARRAY_EXPRESS ]   NUDT16P1 [ SEEK ]   NUDT16P1 [ MEM ]
Gene Expression Viewer (FireBrowse)NUDT16P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)152195
GTEX Portal (Tissue expression)NUDT16P1
Human Protein AtlasENSG00000246082-NUDT16P1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NUDT16P1
DMDM Disease mutations152195
Blocks (Seattle)NUDT16P1
Human Protein Atlas [tissue]ENSG00000246082-NUDT16P1 [tissue]
HPRD14093
IPIIPI00375575   
Protein Interaction databases
FunCoupENSG00000246082
BioGRIDNUDT16P1
STRING (EMBL)NUDT16P1
ZODIACNUDT16P1
Ontologies - Pathways
Huge Navigator NUDT16P1 [HugePedia]
snp3D : Map Gene to Disease152195
BioCentury BCIQNUDT16P1
ClinGenNUDT16P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD152195
Chemical/Pharm GKB GenePA144596399
Clinical trialNUDT16P1
Miscellaneous
canSAR (ICR)NUDT16P1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUDT16P1
EVEXNUDT16P1
GoPubMedNUDT16P1
iHOPNUDT16P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:08:38 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.