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NUP210 (nucleoporin 210)

Identity

Alias (NCBI)GP210
POM210
HGNC (Hugo) NUP210
HGNC Alias symbGP210
POM210
FLJ22389
KIAA0906
HGNC Previous namenucleoporin 210kDa
LocusID (NCBI) 23225
Atlas_Id 46790
Location 3p25.1  [Link to chromosome band 3p25]
Location_base_pair Starts at 13316235 and ends at 13420322 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CASP10 (2q33.1)::NUP210 (3p25.1)MALAT1 (11q13.1)::NUP210 (3p25.1)NUP210 (3p25.1)::FBLN2 (3p25.1)
NUP210 (3p25.1)::FBXO4 (5p13.1)NUP210 (3p25.1)::RPS4X (Xq13.1)NUP210 (3p25.1)::RSRC1 (3q25.32)
NUP210 (3p25.1)::WNT7A (3p25.1)SURF2 (9q34.2)::NUP210 (3p25.1)UBE2E2 (3p24.3)::NUP210 (3p25.1)
NUP210 3p25.1::FBLN2 3p25.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(7;9)(q11;p12) PAX5::POM121


External links

 

Nomenclature
HGNC (Hugo)NUP210   30052
Cards
Entrez_Gene (NCBI)NUP210    nucleoporin 210
AliasesGP210; POM210
GeneCards (Weizmann)NUP210
Ensembl hg19 (Hinxton)ENSG00000132182 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132182 [Gene_View]  ENSG00000132182 [Sequence]  chr3:13316235-13420322 [Contig_View]  NUP210 [Vega]
ICGC DataPortalENSG00000132182
TCGA cBioPortalNUP210
AceView (NCBI)NUP210
Genatlas (Paris)NUP210
SOURCE (Princeton)NUP210
Genetics Home Reference (NIH)NUP210
Genomic and cartography
GoldenPath hg38 (UCSC)NUP210  -     chr3:13316235-13420322 -  3p25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NUP210  -     3p25.1   [Description]    (hg19-Feb_2009)
GoldenPathNUP210 - 3p25.1 [CytoView hg19]  NUP210 - 3p25.1 [CytoView hg38]
ImmunoBaseENSG00000132182
Genome Data Viewer NCBINUP210 [Mapview hg19]  
OMIM607703   
Gene and transcription
Genbank (Entrez)AA909765 AB020713 AK026042 AK074101 AK075545
RefSeq transcript (Entrez)NM_024923
Consensus coding sequences : CCDS (NCBI)NUP210
Gene ExpressionNUP210 [ NCBI-GEO ]   NUP210 [ EBI - ARRAY_EXPRESS ]   NUP210 [ SEEK ]   NUP210 [ MEM ]
Gene Expression Viewer (FireBrowse)NUP210 [ Firebrowse - Broad ]
GenevisibleExpression of NUP210 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23225
GTEX Portal (Tissue expression)NUP210
Human Protein AtlasENSG00000132182-NUP210 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TEM1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TEM1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TEM1
PhosPhoSitePlusQ8TEM1
Domains : Interpro (EBI)Big_2    Invasin/intimin_cell_adhesion   
Domain families : Pfam (Sanger)Big_2 (PF02368)   
Domain families : Pfam (NCBI)pfam02368   
Domain families : Smart (EMBL)BID_2 (SM00635)  
Conserved Domain (NCBI)NUP210
SuperfamilyQ8TEM1
AlphaFold pdb e-kbQ8TEM1   
Human Protein Atlas [tissue]ENSG00000132182-NUP210 [tissue]
HPRD06368
Protein Interaction databases
DIP (DOE-UCLA)Q8TEM1
IntAct (EBI)Q8TEM1
BioGRIDNUP210
STRING (EMBL)NUP210
ZODIACNUP210
Ontologies - Pathways
QuickGOQ8TEM1
Ontology : AmiGOprotein binding  nuclear envelope  nuclear envelope  nuclear pore  endoplasmic reticulum membrane  protein transport  membrane  integral component of membrane  nuclear membrane  mRNA transport  
Ontology : EGO-EBIprotein binding  nuclear envelope  nuclear envelope  nuclear pore  endoplasmic reticulum membrane  protein transport  membrane  integral component of membrane  nuclear membrane  mRNA transport  
Pathways : BIOCARTABIOCARTA_NPCPATHWAY   
NDEx NetworkNUP210
Atlas of Cancer Signalling NetworkNUP210
Wikipedia pathwaysNUP210
Orthology - Evolution
OrthoDB23225
GeneTree (enSembl)ENSG00000132182
Phylogenetic Trees/Animal Genes : TreeFamNUP210
Homologs : HomoloGeneNUP210
Homology/Alignments : Family Browser (UCSC)NUP210
Gene fusions - Rearrangements
Fusion : MitelmanNUP210::FBLN2 [3p25.1/3p25.1]  
Fusion : QuiverNUP210
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNUP210 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NUP210
dbVarNUP210
ClinVarNUP210
MonarchNUP210
1000_GenomesNUP210 
Exome Variant ServerNUP210
GNOMAD BrowserENSG00000132182
Varsome BrowserNUP210
ACMGNUP210 variants
VarityQ8TEM1
Genomic Variants (DGV)NUP210 [DGVbeta]
DECIPHERNUP210 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNUP210 
Mutations
ICGC Data PortalNUP210 
TCGA Data PortalNUP210 
Broad Tumor PortalNUP210
OASIS PortalNUP210 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNUP210  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DNUP210
Mutations and Diseases : HGMDNUP210
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaNUP210
DgiDB (Drug Gene Interaction Database)NUP210
DoCM (Curated mutations)NUP210
CIViC (Clinical Interpretations of Variants in Cancer)NUP210
Cancer3DNUP210
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607703   
Orphanet
DisGeNETNUP210
MedgenNUP210
Genetic Testing Registry NUP210
NextProtQ8TEM1 [Medical]
GENETestsNUP210
Target ValidationNUP210
Huge Navigator NUP210 [HugePedia]
ClinGenNUP210
Clinical trials, drugs, therapy
MyCancerGenomeNUP210
Protein Interactions : CTDNUP210
Pharm GKB GenePA128394614
PharosQ8TEM1
Clinical trialNUP210
Miscellaneous
canSAR (ICR)NUP210
HarmonizomeNUP210
ARCHS4NUP210
DataMed IndexNUP210
Probes
Litterature
PubMed98 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNUP210
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jan 20 12:50:16 CET 2022

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