Atlas of Genetics and Cytogenetics in Oncology and Haematology


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NUP210P1 (nucleoporin 210 pseudogene 1)

Identity

Alias_namesC3orf46
chromosome 3 open reading frame 46
nucleoporin 210kDa pseudogene 1
Other alias
HGNC (Hugo) NUP210P1
LocusID (NCBI) 255330
Atlas_Id 71041
Location 3q21.3  [Link to chromosome band 3q21]
Location_base_pair Starts at 126662081 and ends at 126671939 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NUP210P1   27399
Cards
Entrez_Gene (NCBI)NUP210P1  255330  nucleoporin 210 pseudogene 1
AliasesC3orf46
GeneCards (Weizmann)NUP210P1
Ensembl hg19 (Hinxton)ENSG00000198284 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198284 [Gene_View]  chr3:126662081-126671939 [Contig_View]  NUP210P1 [Vega]
ICGC DataPortalENSG00000198284
TCGA cBioPortalNUP210P1
AceView (NCBI)NUP210P1
Genatlas (Paris)NUP210P1
WikiGenes255330
SOURCE (Princeton)NUP210P1
Genetics Home Reference (NIH)NUP210P1
Genomic and cartography
GoldenPath hg38 (UCSC)NUP210P1  -     chr3:126662081-126671939 +  3q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NUP210P1  -     3q21.3   [Description]    (hg19-Feb_2009)
EnsemblNUP210P1 - 3q21.3 [CytoView hg19]  NUP210P1 - 3q21.3 [CytoView hg38]
Mapping of homologs : NCBINUP210P1 [Mapview hg19]  NUP210P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC042038
RefSeq transcript (Entrez)NM_174935
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NUP210P1
Cluster EST : UnigeneHs.145435 [ NCBI ]
CGAP (NCI)Hs.145435
Alternative Splicing GalleryENSG00000198284
Gene ExpressionNUP210P1 [ NCBI-GEO ]   NUP210P1 [ EBI - ARRAY_EXPRESS ]   NUP210P1 [ SEEK ]   NUP210P1 [ MEM ]
Gene Expression Viewer (FireBrowse)NUP210P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)255330
GTEX Portal (Tissue expression)NUP210P1
Human Protein AtlasENSG00000198284-NUP210P1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NUP210P1
DMDM Disease mutations255330
Blocks (Seattle)NUP210P1
Human Protein Atlas [tissue]ENSG00000198284-NUP210P1 [tissue]
IPIIPI00217137   
Protein Interaction databases
FunCoupENSG00000198284
BioGRIDNUP210P1
STRING (EMBL)NUP210P1
ZODIACNUP210P1
Ontologies - Pathways
Huge Navigator NUP210P1 [HugePedia]
snp3D : Map Gene to Disease255330
BioCentury BCIQNUP210P1
ClinGenNUP210P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD255330
Chemical/Pharm GKB GenePA143485323
Clinical trialNUP210P1
Miscellaneous
canSAR (ICR)NUP210P1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUP210P1
EVEXNUP210P1
GoPubMedNUP210P1
iHOPNUP210P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:03:57 CET 2017

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