Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NUP50-AS1 (NUP50 antisense RNA 1 (head to head))

Identity

Other alias-
HGNC (Hugo) NUP50-AS1
LocusID (NCBI) 100506714
Atlas_Id 71046
Location 22q13.31  [Link to chromosome band 22q13]
Location_base_pair Starts at 45529639 and ends at 45559662 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NUP50-AS1   50502
Cards
Entrez_Gene (NCBI)NUP50-AS1  100506714  NUP50 antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)NUP50-AS1
Ensembl hg19 (Hinxton) [Gene_View]  chr22:45529639-45559662 [Contig_View]  NUP50-AS1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:45529639-45559662 [Contig_View]  NUP50-AS1 [Vega]
TCGA cBioPortalNUP50-AS1
AceView (NCBI)NUP50-AS1
Genatlas (Paris)NUP50-AS1
WikiGenes100506714
SOURCE (Princeton)NUP50-AS1
Genetics Home Reference (NIH)NUP50-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)NUP50-AS1  -     chr22:45529639-45559662 -  22q13.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NUP50-AS1  -     22q13.31   [Description]    (hg38-Dec_2013)
EnsemblNUP50-AS1 - 22q13.31 [CytoView hg19]  NUP50-AS1 - 22q13.31 [CytoView hg38]
Mapping of homologs : NCBINUP50-AS1 [Mapview hg19]  NUP50-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC044653 HG512349 HG512350 HG512351
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)NUP50-AS1
Cluster EST : UnigeneHs.189902 [ NCBI ]
CGAP (NCI)Hs.189902
Gene ExpressionNUP50-AS1 [ NCBI-GEO ]   NUP50-AS1 [ EBI - ARRAY_EXPRESS ]   NUP50-AS1 [ SEEK ]   NUP50-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)NUP50-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506714
GTEX Portal (Tissue expression)NUP50-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NUP50-AS1
DMDM Disease mutations100506714
Blocks (Seattle)NUP50-AS1
Protein Interaction databases
BioGRIDNUP50-AS1
STRING (EMBL)NUP50-AS1
ZODIACNUP50-AS1
Ontologies - Pathways
Huge Navigator NUP50-AS1 [HugePedia]
snp3D : Map Gene to Disease100506714
BioCentury BCIQNUP50-AS1
ClinGenNUP50-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506714
Clinical trialNUP50-AS1
Miscellaneous
canSAR (ICR)NUP50-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUP50-AS1
EVEXNUP50-AS1
GoPubMedNUP50-AS1
iHOPNUP50-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:35:37 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.