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NUPR1 (nuclear protein 1, transcriptional regulator)

Identity

Alias_symbol (synonym)COM1
p8
Other aliasP8
HGNC (Hugo) NUPR1
LocusID (NCBI) 26471
Atlas_Id 41627
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 28537341 and ends at 28539174 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NUPR1   29990
Cards
Entrez_Gene (NCBI)NUPR1  26471  nuclear protein 1, transcriptional regulator
AliasesCOM1; P8
GeneCards (Weizmann)NUPR1
Ensembl hg19 (Hinxton)ENSG00000176046 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176046 [Gene_View]  chr16:28537341-28539174 [Contig_View]  NUPR1 [Vega]
ICGC DataPortalENSG00000176046
TCGA cBioPortalNUPR1
AceView (NCBI)NUPR1
Genatlas (Paris)NUPR1
WikiGenes26471
SOURCE (Princeton)NUPR1
Genetics Home Reference (NIH)NUPR1
Genomic and cartography
GoldenPath hg38 (UCSC)NUPR1  -     chr16:28537341-28539174 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NUPR1  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblNUPR1 - 16p11.2 [CytoView hg19]  NUPR1 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBINUPR1 [Mapview hg19]  NUPR1 [Mapview hg38]
OMIM614812   
Gene and transcription
Genbank (Entrez)AF069073 AF135266 AK312135 BC002434 BF965595
RefSeq transcript (Entrez)NM_001042483 NM_012385
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NUPR1
Cluster EST : UnigeneHs.513463 [ NCBI ]
CGAP (NCI)Hs.513463
Alternative Splicing GalleryENSG00000176046
Gene ExpressionNUPR1 [ NCBI-GEO ]   NUPR1 [ EBI - ARRAY_EXPRESS ]   NUPR1 [ SEEK ]   NUPR1 [ MEM ]
Gene Expression Viewer (FireBrowse)NUPR1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26471
GTEX Portal (Tissue expression)NUPR1
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60356   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60356  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60356
Splice isoforms : SwissVarO60356
PhosPhoSitePlusO60356
Domains : Interpro (EBI)NUPR1-like   
Domain families : Pfam (Sanger)Phospho_p8 (PF10195)   
Domain families : Pfam (NCBI)pfam10195   
Conserved Domain (NCBI)NUPR1
DMDM Disease mutations26471
Blocks (Seattle)NUPR1
SuperfamilyO60356
Human Protein AtlasENSG00000176046
Peptide AtlasO60356
HPRD17814
IPIIPI00029073   IPI00783813   
Protein Interaction databases
DIP (DOE-UCLA)O60356
IntAct (EBI)O60356
FunCoupENSG00000176046
BioGRIDNUPR1
STRING (EMBL)NUPR1
ZODIACNUPR1
Ontologies - Pathways
QuickGOO60356
Ontology : AmiGOacute inflammatory response  molecular_function  DNA binding  chromatin binding  nucleus  cytosol  transcription, DNA-templated  regulation of transcription from RNA polymerase II promoter  protein complex assembly  protein acetylation  male gonad development  response to toxic substance  cell growth  positive regulation of protein modification process  protein-DNA complex  skeletal muscle cell differentiation  intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator  positive regulation of apoptotic process  negative regulation of cell cycle  negative regulation of fibroblast proliferation  regulation of female gonad development  
Ontology : EGO-EBIacute inflammatory response  molecular_function  DNA binding  chromatin binding  nucleus  cytosol  transcription, DNA-templated  regulation of transcription from RNA polymerase II promoter  protein complex assembly  protein acetylation  male gonad development  response to toxic substance  cell growth  positive regulation of protein modification process  protein-DNA complex  skeletal muscle cell differentiation  intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator  positive regulation of apoptotic process  negative regulation of cell cycle  negative regulation of fibroblast proliferation  regulation of female gonad development  
Pathways : KEGGTranscriptional misregulation in cancer   
NDEx NetworkNUPR1
Atlas of Cancer Signalling NetworkNUPR1
Wikipedia pathwaysNUPR1
Orthology - Evolution
OrthoDB26471
GeneTree (enSembl)ENSG00000176046
Phylogenetic Trees/Animal Genes : TreeFamNUPR1
HOVERGENO60356
HOGENOMO60356
Homologs : HomoloGeneNUPR1
Homology/Alignments : Family Browser (UCSC)NUPR1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNUPR1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NUPR1
dbVarNUPR1
ClinVarNUPR1
1000_GenomesNUPR1 
Exome Variant ServerNUPR1
ExAC (Exome Aggregation Consortium)NUPR1 (select the gene name)
Genetic variants : HAPMAP26471
Genomic Variants (DGV)NUPR1 [DGVbeta]
DECIPHERNUPR1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNUPR1 
Mutations
ICGC Data PortalNUPR1 
TCGA Data PortalNUPR1 
Broad Tumor PortalNUPR1
OASIS PortalNUPR1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNUPR1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNUPR1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NUPR1
DgiDB (Drug Gene Interaction Database)NUPR1
DoCM (Curated mutations)NUPR1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NUPR1 (select a term)
intoGenNUPR1
Cancer3DNUPR1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614812   
Orphanet
MedgenNUPR1
Genetic Testing Registry NUPR1
NextProtO60356 [Medical]
TSGene26471
GENETestsNUPR1
Target ValidationNUPR1
Huge Navigator NUPR1 [HugePedia]
snp3D : Map Gene to Disease26471
BioCentury BCIQNUPR1
ClinGenNUPR1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26471
Chemical/Pharm GKB GenePA165450395
Clinical trialNUPR1
Miscellaneous
canSAR (ICR)NUPR1 (select the gene name)
Probes
Litterature
PubMed54 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUPR1
EVEXNUPR1
GoPubMedNUPR1
iHOPNUPR1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:47:43 CEST 2017

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