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NUPR1L (nuclear protein, transcriptional regulator, 1-like)

Identity

Other alias-
HGNC (Hugo) NUPR1L
LocusID (NCBI) 389493
Atlas_Id 71051
Location 7p11.2  [Link to chromosome band 7p11]
Location_base_pair Starts at 56182374 and ends at 56184090 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NUPR1L   44164
Cards
Entrez_Gene (NCBI)NUPR1L  389493  nuclear protein, transcriptional regulator, 1-like
Aliases
GeneCards (Weizmann)NUPR1L
Ensembl hg19 (Hinxton)ENSG00000185290 [Gene_View]  chr7:56182374-56184090 [Contig_View]  NUPR1L [Vega]
Ensembl hg38 (Hinxton)ENSG00000185290 [Gene_View]  chr7:56182374-56184090 [Contig_View]  NUPR1L [Vega]
ICGC DataPortalENSG00000185290
TCGA cBioPortalNUPR1L
AceView (NCBI)NUPR1L
Genatlas (Paris)NUPR1L
WikiGenes389493
SOURCE (Princeton)NUPR1L
Genetics Home Reference (NIH)NUPR1L
Genomic and cartography
GoldenPath hg19 (UCSC)NUPR1L  -     chr7:56182374-56184090 -  7p11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NUPR1L  -     7p11.2   [Description]    (hg38-Dec_2013)
EnsemblNUPR1L - 7p11.2 [CytoView hg19]  NUPR1L - 7p11.2 [CytoView hg38]
Mapping of homologs : NCBINUPR1L [Mapview hg19]  NUPR1L [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043523
RefSeq transcript (Entrez)NM_001145712
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929330
Consensus coding sequences : CCDS (NCBI)NUPR1L
Cluster EST : UnigeneHs.177948 [ NCBI ]
CGAP (NCI)Hs.177948
Alternative Splicing GalleryENSG00000185290
Gene ExpressionNUPR1L [ NCBI-GEO ]   NUPR1L [ EBI - ARRAY_EXPRESS ]   NUPR1L [ SEEK ]   NUPR1L [ MEM ]
Gene Expression Viewer (FireBrowse)NUPR1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)389493
GTEX Portal (Tissue expression)NUPR1L
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NF83   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NF83  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NF83
Splice isoforms : SwissVarA6NF83
PhosPhoSitePlusA6NF83
Domains : Interpro (EBI)Nuclear_phosphoprot_p8_DNA-bd   
Domain families : Pfam (Sanger)Phospho_p8 (PF10195)   
Domain families : Pfam (NCBI)pfam10195   
Conserved Domain (NCBI)NUPR1L
DMDM Disease mutations389493
Blocks (Seattle)NUPR1L
SuperfamilyA6NF83
Human Protein AtlasENSG00000185290
Peptide AtlasA6NF83
IPIIPI00923482   
Protein Interaction databases
DIP (DOE-UCLA)A6NF83
IntAct (EBI)A6NF83
FunCoupENSG00000185290
BioGRIDNUPR1L
STRING (EMBL)NUPR1L
ZODIACNUPR1L
Ontologies - Pathways
QuickGOA6NF83
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkNUPR1L
Atlas of Cancer Signalling NetworkNUPR1L
Wikipedia pathwaysNUPR1L
Orthology - Evolution
OrthoDB389493
GeneTree (enSembl)ENSG00000185290
Phylogenetic Trees/Animal Genes : TreeFamNUPR1L
HOVERGENA6NF83
HOGENOMA6NF83
Homologs : HomoloGeneNUPR1L
Homology/Alignments : Family Browser (UCSC)NUPR1L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNUPR1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NUPR1L
dbVarNUPR1L
ClinVarNUPR1L
1000_GenomesNUPR1L 
Exome Variant ServerNUPR1L
ExAC (Exome Aggregation Consortium)NUPR1L (select the gene name)
Genetic variants : HAPMAP389493
Genomic Variants (DGV)NUPR1L [DGVbeta]
DECIPHER (Syndromes)7:56182374-56184090  ENSG00000185290
CONAN: Copy Number AnalysisNUPR1L 
Mutations
ICGC Data PortalNUPR1L 
TCGA Data PortalNUPR1L 
Broad Tumor PortalNUPR1L
OASIS PortalNUPR1L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNUPR1L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNUPR1L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NUPR1L
DgiDB (Drug Gene Interaction Database)NUPR1L
DoCM (Curated mutations)NUPR1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NUPR1L (select a term)
intoGenNUPR1L
Cancer3DNUPR1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNUPR1L
Genetic Testing Registry NUPR1L
NextProtA6NF83 [Medical]
TSGene389493
GENETestsNUPR1L
Huge Navigator NUPR1L [HugePedia]
snp3D : Map Gene to Disease389493
BioCentury BCIQNUPR1L
ClinGenNUPR1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389493
Clinical trialNUPR1L
Miscellaneous
canSAR (ICR)NUPR1L (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUPR1L
EVEXNUPR1L
GoPubMedNUPR1L
iHOPNUPR1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:35:38 CET 2017

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