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NUPR2 (nuclear protein 2, transcriptional regulator)

Identity

Alias_namesNUPR1L
nuclear protein
Other alias
HGNC (Hugo) NUPR2
LocusID (NCBI) 389493
Atlas_Id 55534
Location 7p11.2  [Link to chromosome band 7p11]
Location_base_pair Starts at 56114681 and ends at 56116397 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NUPR2   44164
Cards
Entrez_Gene (NCBI)NUPR2  389493  nuclear protein 2, transcriptional regulator
AliasesNUPR1L
GeneCards (Weizmann)NUPR2
Ensembl hg19 (Hinxton)ENSG00000185290 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185290 [Gene_View]  chr7:56114681-56116397 [Contig_View]  NUPR2 [Vega]
ICGC DataPortalENSG00000185290
TCGA cBioPortalNUPR2
AceView (NCBI)NUPR2
Genatlas (Paris)NUPR2
WikiGenes389493
SOURCE (Princeton)NUPR2
Genetics Home Reference (NIH)NUPR2
Genomic and cartography
GoldenPath hg38 (UCSC)NUPR2  -     chr7:56114681-56116397 -  7p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NUPR2  -     7p11.2   [Description]    (hg19-Feb_2009)
EnsemblNUPR2 - 7p11.2 [CytoView hg19]  NUPR2 - 7p11.2 [CytoView hg38]
Mapping of homologs : NCBINUPR2 [Mapview hg19]  NUPR2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043523
RefSeq transcript (Entrez)NM_001145712
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NUPR2
Cluster EST : UnigeneHs.177948 [ NCBI ]
CGAP (NCI)Hs.177948
Alternative Splicing GalleryENSG00000185290
Gene ExpressionNUPR2 [ NCBI-GEO ]   NUPR2 [ EBI - ARRAY_EXPRESS ]   NUPR2 [ SEEK ]   NUPR2 [ MEM ]
Gene Expression Viewer (FireBrowse)NUPR2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)389493
GTEX Portal (Tissue expression)NUPR2
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NF83   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NF83  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NF83
Splice isoforms : SwissVarA6NF83
PhosPhoSitePlusA6NF83
Domains : Interpro (EBI)NUPR1-like   
Domain families : Pfam (Sanger)Phospho_p8 (PF10195)   
Domain families : Pfam (NCBI)pfam10195   
Conserved Domain (NCBI)NUPR2
DMDM Disease mutations389493
Blocks (Seattle)NUPR2
SuperfamilyA6NF83
Human Protein AtlasENSG00000185290
Peptide AtlasA6NF83
IPIIPI00923482   
Protein Interaction databases
DIP (DOE-UCLA)A6NF83
IntAct (EBI)A6NF83
FunCoupENSG00000185290
BioGRIDNUPR2
STRING (EMBL)NUPR2
ZODIACNUPR2
Ontologies - Pathways
QuickGOA6NF83
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  chromatin binding  nucleus  transcription, DNA-templated  cellular response to DNA damage stimulus  cell cycle arrest  negative regulation of cell proliferation  cellular response to starvation  negative regulation of cell cycle arrest  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  chromatin binding  nucleus  transcription, DNA-templated  cellular response to DNA damage stimulus  cell cycle arrest  negative regulation of cell proliferation  cellular response to starvation  negative regulation of cell cycle arrest  
NDEx NetworkNUPR2
Atlas of Cancer Signalling NetworkNUPR2
Wikipedia pathwaysNUPR2
Orthology - Evolution
OrthoDB389493
GeneTree (enSembl)ENSG00000185290
Phylogenetic Trees/Animal Genes : TreeFamNUPR2
HOVERGENA6NF83
HOGENOMA6NF83
Homologs : HomoloGeneNUPR2
Homology/Alignments : Family Browser (UCSC)NUPR2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNUPR2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NUPR2
dbVarNUPR2
ClinVarNUPR2
1000_GenomesNUPR2 
Exome Variant ServerNUPR2
ExAC (Exome Aggregation Consortium)NUPR2 (select the gene name)
Genetic variants : HAPMAP389493
Genomic Variants (DGV)NUPR2 [DGVbeta]
DECIPHERNUPR2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNUPR2 
Mutations
ICGC Data PortalNUPR2 
TCGA Data PortalNUPR2 
Broad Tumor PortalNUPR2
OASIS PortalNUPR2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNUPR2
BioMutasearch NUPR2
DgiDB (Drug Gene Interaction Database)NUPR2
DoCM (Curated mutations)NUPR2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NUPR2 (select a term)
intoGenNUPR2
Cancer3DNUPR2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNUPR2
Genetic Testing Registry NUPR2
NextProtA6NF83 [Medical]
TSGene389493
GENETestsNUPR2
Target ValidationNUPR2
Huge Navigator NUPR2 [HugePedia]
snp3D : Map Gene to Disease389493
BioCentury BCIQNUPR2
ClinGenNUPR2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389493
Chemical/Pharm GKB GenePA166049111
Clinical trialNUPR2
Miscellaneous
canSAR (ICR)NUPR2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUPR2
EVEXNUPR2
GoPubMedNUPR2
iHOPNUPR2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 14:02:09 CEST 2017

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