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NUSAP1 (nucleolar and spindle associated protein 1)

Identity

Alias_symbol (synonym)FLJ13421
LNP
ANKT
NuSAP1
SAPL
BM037
PRO0310p1
Q0310
Other aliasNUSAP
HGNC (Hugo) NUSAP1
LocusID (NCBI) 51203
Atlas_Id 51490
Location 15q15.1  [Link to chromosome band 15q15]
Location_base_pair Starts at 41624892 and ends at 41673248 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CD74 (5q32) / NUSAP1 (15q15.1)NUSAP1 (15q15.1) / RRNAD1 (1q23.1)NUSAP1 (15q15.1) / ZNF445 (3p21.31)
OIP5 (15q15.1) / NUSAP1 (15q15.1)OIP5 15q15.1 / NUSAP1 15q15.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NUSAP1   18538
Cards
Entrez_Gene (NCBI)NUSAP1  51203  nucleolar and spindle associated protein 1
AliasesANKT; BM037; LNP; NUSAP; 
PRO0310p1; Q0310; SAPL
GeneCards (Weizmann)NUSAP1
Ensembl hg19 (Hinxton)ENSG00000137804 [Gene_View]  chr15:41624892-41673248 [Contig_View]  NUSAP1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000137804 [Gene_View]  chr15:41624892-41673248 [Contig_View]  NUSAP1 [Vega]
ICGC DataPortalENSG00000137804
TCGA cBioPortalNUSAP1
AceView (NCBI)NUSAP1
Genatlas (Paris)NUSAP1
WikiGenes51203
SOURCE (Princeton)NUSAP1
Genetics Home Reference (NIH)NUSAP1
Genomic and cartography
GoldenPath hg19 (UCSC)NUSAP1  -     chr15:41624892-41673248 +  15q15.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NUSAP1  -     15q15.1   [Description]    (hg38-Dec_2013)
EnsemblNUSAP1 - 15q15.1 [CytoView hg19]  NUSAP1 - 15q15.1 [CytoView hg38]
Mapping of homologs : NCBINUSAP1 [Mapview hg19]  NUSAP1 [Mapview hg38]
OMIM612818   
Gene and transcription
Genbank (Entrez)AF090915 AF217513 AF290612 AF305711 AK023483
RefSeq transcript (Entrez)NM_001129897 NM_001243142 NM_001243143 NM_001243144 NM_001301136 NM_016359 NM_018454
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NW_004929398
Consensus coding sequences : CCDS (NCBI)NUSAP1
Cluster EST : UnigeneHs.615092 [ NCBI ]
CGAP (NCI)Hs.615092
Alternative Splicing GalleryENSG00000137804
Gene ExpressionNUSAP1 [ NCBI-GEO ]   NUSAP1 [ EBI - ARRAY_EXPRESS ]   NUSAP1 [ SEEK ]   NUSAP1 [ MEM ]
Gene Expression Viewer (FireBrowse)NUSAP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51203
GTEX Portal (Tissue expression)NUSAP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXS6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXS6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXS6
Splice isoforms : SwissVarQ9BXS6
PhosPhoSitePlusQ9BXS6
Domains : Interpro (EBI)NuSAP   
Domain families : Pfam (Sanger)NUSAP (PF16006)   
Domain families : Pfam (NCBI)pfam16006   
Conserved Domain (NCBI)NUSAP1
DMDM Disease mutations51203
Blocks (Seattle)NUSAP1
SuperfamilyQ9BXS6
Human Protein AtlasENSG00000137804
Peptide AtlasQ9BXS6
IPIIPI00000398   IPI00020484   IPI00789679   IPI00855788   IPI00793551   IPI00908380   IPI00900282   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXS6
IntAct (EBI)Q9BXS6
FunCoupENSG00000137804
BioGRIDNUSAP1
STRING (EMBL)NUSAP1
ZODIACNUSAP1
Ontologies - Pathways
QuickGOQ9BXS6
Ontology : AmiGOmitotic sister chromatid segregation  mitotic cytokinesis  DNA binding  protein binding  nucleus  chromosome  nucleolus  cytoplasm  spindle microtubule  mitotic chromosome condensation  microtubule binding  establishment of mitotic spindle localization  poly(A) RNA binding  positive regulation of mitotic nuclear division  
Ontology : EGO-EBImitotic sister chromatid segregation  mitotic cytokinesis  DNA binding  protein binding  nucleus  chromosome  nucleolus  cytoplasm  spindle microtubule  mitotic chromosome condensation  microtubule binding  establishment of mitotic spindle localization  poly(A) RNA binding  positive regulation of mitotic nuclear division  
NDEx NetworkNUSAP1
Atlas of Cancer Signalling NetworkNUSAP1
Wikipedia pathwaysNUSAP1
Orthology - Evolution
OrthoDB51203
GeneTree (enSembl)ENSG00000137804
Phylogenetic Trees/Animal Genes : TreeFamNUSAP1
HOVERGENQ9BXS6
HOGENOMQ9BXS6
Homologs : HomoloGeneNUSAP1
Homology/Alignments : Family Browser (UCSC)NUSAP1
Gene fusions - Rearrangements
Fusion : MitelmanOIP5/NUSAP1 [15q15.1/15q15.1]  [t(15;15)(q15;q15)]  
Fusion: TCGAOIP5 15q15.1 NUSAP1 15q15.1 BRCA
Fusion Cancer (Beijing)NUSAP1 [15q15.1]  -  ZNF445 [3p21.31]  [FUSC000200]
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNUSAP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NUSAP1
dbVarNUSAP1
ClinVarNUSAP1
1000_GenomesNUSAP1 
Exome Variant ServerNUSAP1
ExAC (Exome Aggregation Consortium)NUSAP1 (select the gene name)
Genetic variants : HAPMAP51203
Genomic Variants (DGV)NUSAP1 [DGVbeta]
DECIPHER (Syndromes)15:41624892-41673248  ENSG00000137804
CONAN: Copy Number AnalysisNUSAP1 
Mutations
ICGC Data PortalNUSAP1 
TCGA Data PortalNUSAP1 
Broad Tumor PortalNUSAP1
OASIS PortalNUSAP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNUSAP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNUSAP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NUSAP1
DgiDB (Drug Gene Interaction Database)NUSAP1
DoCM (Curated mutations)NUSAP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NUSAP1 (select a term)
intoGenNUSAP1
Cancer3DNUSAP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612818   
Orphanet
MedgenNUSAP1
Genetic Testing Registry NUSAP1
NextProtQ9BXS6 [Medical]
TSGene51203
GENETestsNUSAP1
Huge Navigator NUSAP1 [HugePedia]
snp3D : Map Gene to Disease51203
BioCentury BCIQNUSAP1
ClinGenNUSAP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51203
Chemical/Pharm GKB GenePA134987502
Clinical trialNUSAP1
Miscellaneous
canSAR (ICR)NUSAP1 (select the gene name)
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUSAP1
EVEXNUSAP1
GoPubMedNUSAP1
iHOPNUSAP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:19:39 CET 2017

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