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NUTM2D (NUT family member 2D)

Identity

Alias_namesFAM22D
family with sequence similarity 22, member D
Other alias
HGNC (Hugo) NUTM2D
LocusID (NCBI) 728130
Atlas_Id 71055
Location 10q23.2  [Link to chromosome band 10q23]
Location_base_pair Starts at 87357720 and ends at 87370695 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NUTM2D   23447
Cards
Entrez_Gene (NCBI)NUTM2D  728130  NUT family member 2D
AliasesFAM22D
GeneCards (Weizmann)NUTM2D
Ensembl hg19 (Hinxton)ENSG00000214562 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214562 [Gene_View]  chr10:87357720-87370695 [Contig_View]  NUTM2D [Vega]
ICGC DataPortalENSG00000214562
TCGA cBioPortalNUTM2D
AceView (NCBI)NUTM2D
Genatlas (Paris)NUTM2D
WikiGenes728130
SOURCE (Princeton)NUTM2D
Genetics Home Reference (NIH)NUTM2D
Genomic and cartography
GoldenPath hg38 (UCSC)NUTM2D  -     chr10:87357720-87370695 +  10q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NUTM2D  -     10q23.2   [Description]    (hg19-Feb_2009)
EnsemblNUTM2D - 10q23.2 [CytoView hg19]  NUTM2D - 10q23.2 [CytoView hg38]
Mapping of homologs : NCBINUTM2D [Mapview hg19]  NUTM2D [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB095940
RefSeq transcript (Entrez)NM_001009610
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NUTM2D
Cluster EST : UnigeneHs.710565 [ NCBI ]
CGAP (NCI)Hs.710565
Alternative Splicing GalleryENSG00000214562
Gene ExpressionNUTM2D [ NCBI-GEO ]   NUTM2D [ EBI - ARRAY_EXPRESS ]   NUTM2D [ SEEK ]   NUTM2D [ MEM ]
Gene Expression Viewer (FireBrowse)NUTM2D [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728130
GTEX Portal (Tissue expression)NUTM2D
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5VT03   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5VT03  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5VT03
Splice isoforms : SwissVarQ5VT03
PhosPhoSitePlusQ5VT03
Domains : Interpro (EBI)NUT    NUT_N   
Domain families : Pfam (Sanger)NUT (PF12881)   
Domain families : Pfam (NCBI)pfam12881   
Conserved Domain (NCBI)NUTM2D
DMDM Disease mutations728130
Blocks (Seattle)NUTM2D
SuperfamilyQ5VT03
Human Protein AtlasENSG00000214562
Peptide AtlasQ5VT03
IPIIPI00749263   IPI00651661   IPI00479103   IPI00941743   
Protein Interaction databases
DIP (DOE-UCLA)Q5VT03
IntAct (EBI)Q5VT03
FunCoupENSG00000214562
BioGRIDNUTM2D
STRING (EMBL)NUTM2D
ZODIACNUTM2D
Ontologies - Pathways
QuickGOQ5VT03
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkNUTM2D
Atlas of Cancer Signalling NetworkNUTM2D
Wikipedia pathwaysNUTM2D
Orthology - Evolution
OrthoDB728130
GeneTree (enSembl)ENSG00000214562
Phylogenetic Trees/Animal Genes : TreeFamNUTM2D
HOVERGENQ5VT03
HOGENOMQ5VT03
Homologs : HomoloGeneNUTM2D
Homology/Alignments : Family Browser (UCSC)NUTM2D
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNUTM2D [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NUTM2D
dbVarNUTM2D
ClinVarNUTM2D
1000_GenomesNUTM2D 
Exome Variant ServerNUTM2D
ExAC (Exome Aggregation Consortium)NUTM2D (select the gene name)
Genetic variants : HAPMAP728130
Genomic Variants (DGV)NUTM2D [DGVbeta]
DECIPHERNUTM2D [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNUTM2D 
Mutations
ICGC Data PortalNUTM2D 
TCGA Data PortalNUTM2D 
Broad Tumor PortalNUTM2D
OASIS PortalNUTM2D [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNUTM2D
BioMutasearch NUTM2D
DgiDB (Drug Gene Interaction Database)NUTM2D
DoCM (Curated mutations)NUTM2D (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NUTM2D (select a term)
intoGenNUTM2D
Cancer3DNUTM2D(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNUTM2D
Genetic Testing Registry NUTM2D
NextProtQ5VT03 [Medical]
TSGene728130
GENETestsNUTM2D
Target ValidationNUTM2D
Huge Navigator NUTM2D [HugePedia]
snp3D : Map Gene to Disease728130
BioCentury BCIQNUTM2D
ClinGenNUTM2D
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728130
Chemical/Pharm GKB GenePA134912178
Clinical trialNUTM2D
Miscellaneous
canSAR (ICR)NUTM2D (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUTM2D
EVEXNUTM2D
GoPubMedNUTM2D
iHOPNUTM2D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:30 CEST 2017

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