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NUTM2F (NUT family member 2F)

Identity

Alias_namesFAM22F
family with sequence similarity 22, member F
Alias_symbol (synonym)DKFZp434I1117
Other aliasNUTMF
HGNC (Hugo) NUTM2F
LocusID (NCBI) 54754
Atlas_Id 71056
Location 9q22.32  [Link to chromosome band 9q22]
Location_base_pair Starts at 97080478 and ends at 97090926 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NUTM2F   23450
Cards
Entrez_Gene (NCBI)NUTM2F  54754  NUT family member 2F
AliasesFAM22F; NUTMF
GeneCards (Weizmann)NUTM2F
Ensembl hg19 (Hinxton)ENSG00000130950 [Gene_View]  chr9:97080478-97090926 [Contig_View]  NUTM2F [Vega]
Ensembl hg38 (Hinxton)ENSG00000130950 [Gene_View]  chr9:97080478-97090926 [Contig_View]  NUTM2F [Vega]
ICGC DataPortalENSG00000130950
TCGA cBioPortalNUTM2F
AceView (NCBI)NUTM2F
Genatlas (Paris)NUTM2F
WikiGenes54754
SOURCE (Princeton)NUTM2F
Genetics Home Reference (NIH)NUTM2F
Genomic and cartography
GoldenPath hg19 (UCSC)NUTM2F  -     chr9:97080478-97090926 -  9q22.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NUTM2F  -     9q22.32   [Description]    (hg38-Dec_2013)
EnsemblNUTM2F - 9q22.32 [CytoView hg19]  NUTM2F - 9q22.32 [CytoView hg38]
Mapping of homologs : NCBINUTM2F [Mapview hg19]  NUTM2F [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL133071 BC130390 BC143798 HQ258506
RefSeq transcript (Entrez)NM_017561
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)NUTM2F
Cluster EST : UnigeneHs.648183 [ NCBI ]
CGAP (NCI)Hs.648183
Alternative Splicing GalleryENSG00000130950
Gene ExpressionNUTM2F [ NCBI-GEO ]   NUTM2F [ EBI - ARRAY_EXPRESS ]   NUTM2F [ SEEK ]   NUTM2F [ MEM ]
Gene Expression Viewer (FireBrowse)NUTM2F [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54754
GTEX Portal (Tissue expression)NUTM2F
Protein : pattern, domain, 3D structure
UniProt/SwissProtA1L443   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA1L443  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA1L443
Splice isoforms : SwissVarA1L443
PhosPhoSitePlusA1L443
Domains : Interpro (EBI)NUT/FAM22    NUT_C    NUT_N   
Domain families : Pfam (Sanger)NUT_C (PF12882)    NUT_N (PF12881)   
Domain families : Pfam (NCBI)pfam12882    pfam12881   
Conserved Domain (NCBI)NUTM2F
DMDM Disease mutations54754
Blocks (Seattle)NUTM2F
SuperfamilyA1L443
Human Protein AtlasENSG00000130950
Peptide AtlasA1L443
IPIIPI00847848   IPI00935683   IPI00828211   IPI01018242   
Protein Interaction databases
DIP (DOE-UCLA)A1L443
IntAct (EBI)A1L443
FunCoupENSG00000130950
BioGRIDNUTM2F
STRING (EMBL)NUTM2F
ZODIACNUTM2F
Ontologies - Pathways
QuickGOA1L443
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkNUTM2F
Atlas of Cancer Signalling NetworkNUTM2F
Wikipedia pathwaysNUTM2F
Orthology - Evolution
OrthoDB54754
GeneTree (enSembl)ENSG00000130950
Phylogenetic Trees/Animal Genes : TreeFamNUTM2F
HOVERGENA1L443
HOGENOMA1L443
Homologs : HomoloGeneNUTM2F
Homology/Alignments : Family Browser (UCSC)NUTM2F
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNUTM2F [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NUTM2F
dbVarNUTM2F
ClinVarNUTM2F
1000_GenomesNUTM2F 
Exome Variant ServerNUTM2F
ExAC (Exome Aggregation Consortium)NUTM2F (select the gene name)
Genetic variants : HAPMAP54754
Genomic Variants (DGV)NUTM2F [DGVbeta]
DECIPHER (Syndromes)9:97080478-97090926  ENSG00000130950
CONAN: Copy Number AnalysisNUTM2F 
Mutations
ICGC Data PortalNUTM2F 
TCGA Data PortalNUTM2F 
Broad Tumor PortalNUTM2F
OASIS PortalNUTM2F [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNUTM2F
BioMutasearch NUTM2F
DgiDB (Drug Gene Interaction Database)NUTM2F
DoCM (Curated mutations)NUTM2F (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NUTM2F (select a term)
intoGenNUTM2F
Cancer3DNUTM2F(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNUTM2F
Genetic Testing Registry NUTM2F
NextProtA1L443 [Medical]
TSGene54754
GENETestsNUTM2F
Huge Navigator NUTM2F [HugePedia]
snp3D : Map Gene to Disease54754
BioCentury BCIQNUTM2F
ClinGenNUTM2F
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54754
Chemical/Pharm GKB GenePA134981634
Clinical trialNUTM2F
Miscellaneous
canSAR (ICR)NUTM2F (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUTM2F
EVEXNUTM2F
GoPubMedNUTM2F
iHOPNUTM2F
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:35:40 CET 2017

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