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NXPE1 (neurexophilin and PC-esterase domain family, member 1)

Identity

Alias_namesFAM55A
family with sequence similarity 55, member A
neurexophilin and PC-esterase domain family, member 1
Alias_symbol (synonym)MGC34290
Other alias
HGNC (Hugo) NXPE1
LocusID (NCBI) 120400
Atlas_Id 71066
Location 11q23.2  [Link to chromosome band 11q23]
Location_base_pair Starts at 114392437 and ends at 114430617 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NXPE1   28527
Cards
Entrez_Gene (NCBI)NXPE1  120400  neurexophilin and PC-esterase domain family, member 1
AliasesFAM55A
GeneCards (Weizmann)NXPE1
Ensembl hg19 (Hinxton)ENSG00000095110 [Gene_View]  chr11:114392437-114430617 [Contig_View]  NXPE1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000095110 [Gene_View]  chr11:114392437-114430617 [Contig_View]  NXPE1 [Vega]
ICGC DataPortalENSG00000095110
TCGA cBioPortalNXPE1
AceView (NCBI)NXPE1
Genatlas (Paris)NXPE1
WikiGenes120400
SOURCE (Princeton)NXPE1
Genetics Home Reference (NIH)NXPE1
Genomic and cartography
GoldenPath hg19 (UCSC)NXPE1  -     chr11:114392437-114430617 -  11q23.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NXPE1  -     11q23.2   [Description]    (hg38-Dec_2013)
EnsemblNXPE1 - 11q23.2 [CytoView hg19]  NXPE1 - 11q23.2 [CytoView hg38]
Mapping of homologs : NCBINXPE1 [Mapview hg19]  NXPE1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI347274 AK127883 BC029049 BC037844 BX648601
RefSeq transcript (Entrez)NM_152315
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_033899 NW_004929381
Consensus coding sequences : CCDS (NCBI)NXPE1
Cluster EST : UnigeneHs.735553 [ NCBI ]
CGAP (NCI)Hs.735553
Alternative Splicing GalleryENSG00000095110
Gene ExpressionNXPE1 [ NCBI-GEO ]   NXPE1 [ EBI - ARRAY_EXPRESS ]   NXPE1 [ SEEK ]   NXPE1 [ MEM ]
Gene Expression Viewer (FireBrowse)NXPE1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)120400
GTEX Portal (Tissue expression)NXPE1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N323   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N323  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N323
Splice isoforms : SwissVarQ8N323
PhosPhoSitePlusQ8N323
Domains : Interpro (EBI)Ig_E-set    NXPH/NXPE    PC-Esterase   
Domain families : Pfam (Sanger)Neurexophilin (PF06312)    PC-Esterase (PF13839)   
Domain families : Pfam (NCBI)pfam06312    pfam13839   
Conserved Domain (NCBI)NXPE1
DMDM Disease mutations120400
Blocks (Seattle)NXPE1
SuperfamilyQ8N323
Human Protein AtlasENSG00000095110
Peptide AtlasQ8N323
HPRD13315
IPIIPI00868940   IPI00181583   IPI01012211   IPI01009927   IPI01010314   
Protein Interaction databases
DIP (DOE-UCLA)Q8N323
IntAct (EBI)Q8N323
FunCoupENSG00000095110
BioGRIDNXPE1
STRING (EMBL)NXPE1
ZODIACNXPE1
Ontologies - Pathways
QuickGOQ8N323
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkNXPE1
Atlas of Cancer Signalling NetworkNXPE1
Wikipedia pathwaysNXPE1
Orthology - Evolution
OrthoDB120400
GeneTree (enSembl)ENSG00000095110
Phylogenetic Trees/Animal Genes : TreeFamNXPE1
HOVERGENQ8N323
HOGENOMQ8N323
Homologs : HomoloGeneNXPE1
Homology/Alignments : Family Browser (UCSC)NXPE1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNXPE1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NXPE1
dbVarNXPE1
ClinVarNXPE1
1000_GenomesNXPE1 
Exome Variant ServerNXPE1
ExAC (Exome Aggregation Consortium)NXPE1 (select the gene name)
Genetic variants : HAPMAP120400
Genomic Variants (DGV)NXPE1 [DGVbeta]
DECIPHER (Syndromes)11:114392437-114430617  ENSG00000095110
CONAN: Copy Number AnalysisNXPE1 
Mutations
ICGC Data PortalNXPE1 
TCGA Data PortalNXPE1 
Broad Tumor PortalNXPE1
OASIS PortalNXPE1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNXPE1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNXPE1
BioMutasearch NXPE1
DgiDB (Drug Gene Interaction Database)NXPE1
DoCM (Curated mutations)NXPE1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NXPE1 (select a term)
intoGenNXPE1
Cancer3DNXPE1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNXPE1
Genetic Testing Registry NXPE1
NextProtQ8N323 [Medical]
TSGene120400
GENETestsNXPE1
Huge Navigator NXPE1 [HugePedia]
snp3D : Map Gene to Disease120400
BioCentury BCIQNXPE1
ClinGenNXPE1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD120400
Chemical/Pharm GKB GenePA134910690
Clinical trialNXPE1
Miscellaneous
canSAR (ICR)NXPE1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNXPE1
EVEXNXPE1
GoPubMedNXPE1
iHOPNXPE1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:35:41 CET 2017

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