Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NXPE3 (neurexophilin and PC-esterase domain family member 3)

Identity

Alias_namesFAM55C
family with sequence similarity 55, member C
neurexophilin and PC-esterase domain family, member 3
Alias_symbol (synonym)MGC15606
Other aliasMST115
MSTP115
HGNC (Hugo) NXPE3
LocusID (NCBI) 91775
Atlas_Id 71068
Location 3q12.3  [Link to chromosome band 3q12]
Location_base_pair Starts at 101779442 and ends at 101828231 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZPLD1 (3q12.3) / NXPE3 (3q12.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NXPE3   28238
Cards
Entrez_Gene (NCBI)NXPE3  91775  neurexophilin and PC-esterase domain family member 3
AliasesFAM55C; MST115; MSTP115
GeneCards (Weizmann)NXPE3
Ensembl hg19 (Hinxton)ENSG00000144815 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144815 [Gene_View]  chr3:101779442-101828231 [Contig_View]  NXPE3 [Vega]
ICGC DataPortalENSG00000144815
TCGA cBioPortalNXPE3
AceView (NCBI)NXPE3
Genatlas (Paris)NXPE3
WikiGenes91775
SOURCE (Princeton)NXPE3
Genetics Home Reference (NIH)NXPE3
Genomic and cartography
GoldenPath hg38 (UCSC)NXPE3  -     chr3:101779442-101828231 +  3q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NXPE3  -     3q12.3   [Description]    (hg19-Feb_2009)
EnsemblNXPE3 - 3q12.3 [CytoView hg19]  NXPE3 - 3q12.3 [CytoView hg38]
Mapping of homologs : NCBINXPE3 [Mapview hg19]  NXPE3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF173890 AK054664 AK289689 AY358207 BC009431
RefSeq transcript (Entrez)NM_001134456 NM_001348990 NM_001348991 NM_001348992 NM_001348993 NM_001348994 NM_001348995 NM_001348996 NM_001348997 NM_001348998 NM_145037
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NXPE3
Cluster EST : UnigeneHs.595933 [ NCBI ]
CGAP (NCI)Hs.595933
Alternative Splicing GalleryENSG00000144815
Gene ExpressionNXPE3 [ NCBI-GEO ]   NXPE3 [ EBI - ARRAY_EXPRESS ]   NXPE3 [ SEEK ]   NXPE3 [ MEM ]
Gene Expression Viewer (FireBrowse)NXPE3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)91775
GTEX Portal (Tissue expression)NXPE3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ969Y0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ969Y0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ969Y0
Splice isoforms : SwissVarQ969Y0
PhosPhoSitePlusQ969Y0
Domains : Interpro (EBI)Ig_E-set    NXPH/NXPE   
Domain families : Pfam (Sanger)Neurexophilin (PF06312)   
Domain families : Pfam (NCBI)pfam06312   
Conserved Domain (NCBI)NXPE3
DMDM Disease mutations91775
Blocks (Seattle)NXPE3
SuperfamilyQ969Y0
Human Protein AtlasENSG00000144815
Peptide AtlasQ969Y0
HPRD10073
IPIIPI00056537   IPI00945543   IPI00945267   
Protein Interaction databases
DIP (DOE-UCLA)Q969Y0
IntAct (EBI)Q969Y0
FunCoupENSG00000144815
BioGRIDNXPE3
STRING (EMBL)NXPE3
ZODIACNXPE3
Ontologies - Pathways
QuickGOQ969Y0
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkNXPE3
Atlas of Cancer Signalling NetworkNXPE3
Wikipedia pathwaysNXPE3
Orthology - Evolution
OrthoDB91775
GeneTree (enSembl)ENSG00000144815
Phylogenetic Trees/Animal Genes : TreeFamNXPE3
HOVERGENQ969Y0
HOGENOMQ969Y0
Homologs : HomoloGeneNXPE3
Homology/Alignments : Family Browser (UCSC)NXPE3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNXPE3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NXPE3
dbVarNXPE3
ClinVarNXPE3
1000_GenomesNXPE3 
Exome Variant ServerNXPE3
ExAC (Exome Aggregation Consortium)NXPE3 (select the gene name)
Genetic variants : HAPMAP91775
Genomic Variants (DGV)NXPE3 [DGVbeta]
DECIPHERNXPE3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNXPE3 
Mutations
ICGC Data PortalNXPE3 
TCGA Data PortalNXPE3 
Broad Tumor PortalNXPE3
OASIS PortalNXPE3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNXPE3
BioMutasearch NXPE3
DgiDB (Drug Gene Interaction Database)NXPE3
DoCM (Curated mutations)NXPE3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NXPE3 (select a term)
intoGenNXPE3
Cancer3DNXPE3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNXPE3
Genetic Testing Registry NXPE3
NextProtQ969Y0 [Medical]
TSGene91775
GENETestsNXPE3
Target ValidationNXPE3
Huge Navigator NXPE3 [HugePedia]
snp3D : Map Gene to Disease91775
BioCentury BCIQNXPE3
ClinGenNXPE3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91775
Chemical/Pharm GKB GenePA134977295
Clinical trialNXPE3
Miscellaneous
canSAR (ICR)NXPE3 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNXPE3
EVEXNXPE3
GoPubMedNXPE3
iHOPNXPE3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:32:32 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.