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NYAP1 (neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1)

Identity

Alias_namesC7orf51
KIAA1486L
chromosome 7 open reading frame 51
KIAA1486-like
neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1
Alias_symbol (synonym)FLJ37538
Other alias
HGNC (Hugo) NYAP1
LocusID (NCBI) 222950
Atlas_Id 71075
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 100081550 and ends at 100092424 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
NYAP1 (7q22.1) / TXNIP (1q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NYAP1   22009
Cards
Entrez_Gene (NCBI)NYAP1  222950  neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1
AliasesC7orf51
GeneCards (Weizmann)NYAP1
Ensembl hg19 (Hinxton)ENSG00000166924 [Gene_View]  chr7:100081550-100092424 [Contig_View]  NYAP1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000166924 [Gene_View]  chr7:100081550-100092424 [Contig_View]  NYAP1 [Vega]
ICGC DataPortalENSG00000166924
TCGA cBioPortalNYAP1
AceView (NCBI)NYAP1
Genatlas (Paris)NYAP1
WikiGenes222950
SOURCE (Princeton)NYAP1
Genetics Home Reference (NIH)NYAP1
Genomic and cartography
GoldenPath hg19 (UCSC)NYAP1  -     chr7:100081550-100092424 +  7q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NYAP1  -     7q22.1   [Description]    (hg38-Dec_2013)
EnsemblNYAP1 - 7q22.1 [CytoView hg19]  NYAP1 - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBINYAP1 [Mapview hg19]  NYAP1 [Mapview hg38]
OMIM615477   
Gene and transcription
Genbank (Entrez)AA737804 AK094857 AK124773 AY375450 BC041433
RefSeq transcript (Entrez)NM_173564
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)NYAP1
Cluster EST : UnigeneHs.320086 [ NCBI ]
CGAP (NCI)Hs.320086
Alternative Splicing GalleryENSG00000166924
Gene ExpressionNYAP1 [ NCBI-GEO ]   NYAP1 [ EBI - ARRAY_EXPRESS ]   NYAP1 [ SEEK ]   NYAP1 [ MEM ]
Gene Expression Viewer (FireBrowse)NYAP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)222950
GTEX Portal (Tissue expression)NYAP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZVC0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZVC0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZVC0
Splice isoforms : SwissVarQ6ZVC0
PhosPhoSitePlusQ6ZVC0
Domains : Interpro (EBI)NYAP1    NYAP1/NYAP2    NYAP_C   
Domain families : Pfam (Sanger)NYAP_C (PF15452)   
Domain families : Pfam (NCBI)pfam15452   
Conserved Domain (NCBI)NYAP1
DMDM Disease mutations222950
Blocks (Seattle)NYAP1
SuperfamilyQ6ZVC0
Human Protein AtlasENSG00000166924
Peptide AtlasQ6ZVC0
HPRD13427
IPIIPI00376788   IPI00885059   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZVC0
IntAct (EBI)Q6ZVC0
FunCoupENSG00000166924
BioGRIDNYAP1
STRING (EMBL)NYAP1
ZODIACNYAP1
Ontologies - Pathways
QuickGOQ6ZVC0
Ontology : AmiGOintracellular  intracellular  phosphatidylinositol 3-kinase signaling  neuron projection morphogenesis  
Ontology : EGO-EBIintracellular  intracellular  phosphatidylinositol 3-kinase signaling  neuron projection morphogenesis  
NDEx NetworkNYAP1
Atlas of Cancer Signalling NetworkNYAP1
Wikipedia pathwaysNYAP1
Orthology - Evolution
OrthoDB222950
GeneTree (enSembl)ENSG00000166924
Phylogenetic Trees/Animal Genes : TreeFamNYAP1
HOVERGENQ6ZVC0
HOGENOMQ6ZVC0
Homologs : HomoloGeneNYAP1
Homology/Alignments : Family Browser (UCSC)NYAP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNYAP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NYAP1
dbVarNYAP1
ClinVarNYAP1
1000_GenomesNYAP1 
Exome Variant ServerNYAP1
ExAC (Exome Aggregation Consortium)NYAP1 (select the gene name)
Genetic variants : HAPMAP222950
Genomic Variants (DGV)NYAP1 [DGVbeta]
DECIPHER (Syndromes)7:100081550-100092424  ENSG00000166924
CONAN: Copy Number AnalysisNYAP1 
Mutations
ICGC Data PortalNYAP1 
TCGA Data PortalNYAP1 
Broad Tumor PortalNYAP1
OASIS PortalNYAP1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNYAP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NYAP1
DgiDB (Drug Gene Interaction Database)NYAP1
DoCM (Curated mutations)NYAP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NYAP1 (select a term)
intoGenNYAP1
Cancer3DNYAP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615477   
Orphanet
MedgenNYAP1
Genetic Testing Registry NYAP1
NextProtQ6ZVC0 [Medical]
TSGene222950
GENETestsNYAP1
Huge Navigator NYAP1 [HugePedia]
snp3D : Map Gene to Disease222950
BioCentury BCIQNYAP1
ClinGenNYAP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD222950
Chemical/Pharm GKB GenePA162380561
Clinical trialNYAP1
Miscellaneous
canSAR (ICR)NYAP1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNYAP1
EVEXNYAP1
GoPubMedNYAP1
iHOPNYAP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:35:43 CET 2017

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