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NYAP2 (neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2)

Identity

Alias_namesKIAA1486
KIAA1486
Other alias
HGNC (Hugo) NYAP2
LocusID (NCBI) 57624
Atlas_Id 46901
Location 2q36.3  [Link to chromosome band 2q36]
Location_base_pair Starts at 225400886 and ends at 225654018 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SLC25A24 (1p13.3) / NYAP2 (2q36.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NYAP2   29291
Cards
Entrez_Gene (NCBI)NYAP2  57624  neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2
AliasesKIAA1486
GeneCards (Weizmann)NYAP2
Ensembl hg19 (Hinxton)ENSG00000144460 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144460 [Gene_View]  chr2:225400886-225654018 [Contig_View]  NYAP2 [Vega]
ICGC DataPortalENSG00000144460
TCGA cBioPortalNYAP2
AceView (NCBI)NYAP2
Genatlas (Paris)NYAP2
WikiGenes57624
SOURCE (Princeton)NYAP2
Genetics Home Reference (NIH)NYAP2
Genomic and cartography
GoldenPath hg38 (UCSC)NYAP2  -     chr2:225400886-225654018 +  2q36.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NYAP2  -     2q36.3   [Description]    (hg19-Feb_2009)
EnsemblNYAP2 - 2q36.3 [CytoView hg19]  NYAP2 - 2q36.3 [CytoView hg38]
Mapping of homologs : NCBINYAP2 [Mapview hg19]  NYAP2 [Mapview hg38]
OMIM615478   
Gene and transcription
Genbank (Entrez)AB040919 AK055226 BC131727 DA230522
RefSeq transcript (Entrez)NM_020864
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NYAP2
Cluster EST : UnigeneHs.224409 [ NCBI ]
CGAP (NCI)Hs.224409
Alternative Splicing GalleryENSG00000144460
Gene ExpressionNYAP2 [ NCBI-GEO ]   NYAP2 [ EBI - ARRAY_EXPRESS ]   NYAP2 [ SEEK ]   NYAP2 [ MEM ]
Gene Expression Viewer (FireBrowse)NYAP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57624
GTEX Portal (Tissue expression)NYAP2
Human Protein AtlasENSG00000144460-NYAP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P242   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P242  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P242
Splice isoforms : SwissVarQ9P242
PhosPhoSitePlusQ9P242
Domains : Interpro (EBI)NYAP1/NYAP2    NYAP2    NYAP_C   
Domain families : Pfam (Sanger)NYAP_C (PF15452)   
Domain families : Pfam (NCBI)pfam15452   
Conserved Domain (NCBI)NYAP2
DMDM Disease mutations57624
Blocks (Seattle)NYAP2
SuperfamilyQ9P242
Human Protein Atlas [tissue]ENSG00000144460-NYAP2 [tissue]
Peptide AtlasQ9P242
IPIIPI00736556   IPI00829794   IPI00887405   IPI01025734   
Protein Interaction databases
DIP (DOE-UCLA)Q9P242
IntAct (EBI)Q9P242
FunCoupENSG00000144460
BioGRIDNYAP2
STRING (EMBL)NYAP2
ZODIACNYAP2
Ontologies - Pathways
QuickGOQ9P242
Ontology : AmiGOprotein binding  intracellular  phosphatidylinositol 3-kinase signaling  neuron projection morphogenesis  
Ontology : EGO-EBIprotein binding  intracellular  phosphatidylinositol 3-kinase signaling  neuron projection morphogenesis  
NDEx NetworkNYAP2
Atlas of Cancer Signalling NetworkNYAP2
Wikipedia pathwaysNYAP2
Orthology - Evolution
OrthoDB57624
GeneTree (enSembl)ENSG00000144460
Phylogenetic Trees/Animal Genes : TreeFamNYAP2
HOVERGENQ9P242
HOGENOMQ9P242
Homologs : HomoloGeneNYAP2
Homology/Alignments : Family Browser (UCSC)NYAP2
Gene fusions - Rearrangements
Fusion: Tumor Portal NYAP2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNYAP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NYAP2
dbVarNYAP2
ClinVarNYAP2
1000_GenomesNYAP2 
Exome Variant ServerNYAP2
ExAC (Exome Aggregation Consortium)ENSG00000144460
GNOMAD BrowserENSG00000144460
Genetic variants : HAPMAP57624
Genomic Variants (DGV)NYAP2 [DGVbeta]
DECIPHERNYAP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNYAP2 
Mutations
ICGC Data PortalNYAP2 
TCGA Data PortalNYAP2 
Broad Tumor PortalNYAP2
OASIS PortalNYAP2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNYAP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NYAP2
DgiDB (Drug Gene Interaction Database)NYAP2
DoCM (Curated mutations)NYAP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NYAP2 (select a term)
intoGenNYAP2
Cancer3DNYAP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615478   
Orphanet
MedgenNYAP2
Genetic Testing Registry NYAP2
NextProtQ9P242 [Medical]
TSGene57624
GENETestsNYAP2
Target ValidationNYAP2
Huge Navigator NYAP2 [HugePedia]
snp3D : Map Gene to Disease57624
BioCentury BCIQNYAP2
ClinGenNYAP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57624
Chemical/Pharm GKB GenePA165696738
Clinical trialNYAP2
Miscellaneous
canSAR (ICR)NYAP2 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNYAP2
EVEXNYAP2
GoPubMedNYAP2
iHOPNYAP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 13:03:28 CET 2017

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