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OARD1 (O-acyl-ADP-ribose deacylase 1)

Identity

Alias_namesC6orf130
chromosome 6 open reading frame 130
Alias_symbol (synonym)MGC19570
dJ34B21.3
TARG1
Other alias
HGNC (Hugo) OARD1
LocusID (NCBI) 221443
Atlas_Id 71080
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 41066788 and ends at 41097787 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OARD1   21257
Cards
Entrez_Gene (NCBI)OARD1  221443  O-acyl-ADP-ribose deacylase 1
AliasesC6orf130; TARG1; dJ34B21.3
GeneCards (Weizmann)OARD1
Ensembl hg19 (Hinxton)ENSG00000124596 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000124596 [Gene_View]  chr6:41066788-41097787 [Contig_View]  OARD1 [Vega]
ICGC DataPortalENSG00000124596
TCGA cBioPortalOARD1
AceView (NCBI)OARD1
Genatlas (Paris)OARD1
WikiGenes221443
SOURCE (Princeton)OARD1
Genetics Home Reference (NIH)OARD1
Genomic and cartography
GoldenPath hg38 (UCSC)OARD1  -     chr6:41066788-41097787 -  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OARD1  -     6p21.1   [Description]    (hg19-Feb_2009)
EnsemblOARD1 - 6p21.1 [CytoView hg19]  OARD1 - 6p21.1 [CytoView hg38]
Mapping of homologs : NCBIOARD1 [Mapview hg19]  OARD1 [Mapview hg38]
OMIM614393   
Gene and transcription
Genbank (Entrez)AJ420538 AK290939 AK310688 AK313361 BC011709
RefSeq transcript (Entrez)NM_001329684 NM_001329685 NM_001329686 NM_001329688 NM_001329689 NM_001329690 NM_001329691 NM_001329692 NM_001329693 NM_001329694 NM_001329695 NM_001329696 NM_145063
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OARD1
Cluster EST : UnigeneHs.227457 [ NCBI ]
CGAP (NCI)Hs.227457
Alternative Splicing GalleryENSG00000124596
Gene ExpressionOARD1 [ NCBI-GEO ]   OARD1 [ EBI - ARRAY_EXPRESS ]   OARD1 [ SEEK ]   OARD1 [ MEM ]
Gene Expression Viewer (FireBrowse)OARD1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)221443
GTEX Portal (Tissue expression)OARD1
Human Protein AtlasENSG00000124596-OARD1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y530   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y530  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y530
Splice isoforms : SwissVarQ9Y530
PhosPhoSitePlusQ9Y530
Domaine pattern : Prosite (Expaxy)MACRO (PS51154)   
Domains : Interpro (EBI)Macro_dom   
Domain families : Pfam (Sanger)Macro (PF01661)   
Domain families : Pfam (NCBI)pfam01661   
Domain families : Smart (EMBL)A1pp (SM00506)  
Conserved Domain (NCBI)OARD1
DMDM Disease mutations221443
Blocks (Seattle)OARD1
PDB (SRS)2EEE    2L8R    2LGR    4J5Q    4J5R    4J5S   
PDB (PDBSum)2EEE    2L8R    2LGR    4J5Q    4J5R    4J5S   
PDB (IMB)2EEE    2L8R    2LGR    4J5Q    4J5R    4J5S   
PDB (RSDB)2EEE    2L8R    2LGR    4J5Q    4J5R    4J5S   
Structural Biology KnowledgeBase2EEE    2L8R    2LGR    4J5Q    4J5R    4J5S   
SCOP (Structural Classification of Proteins)2EEE    2L8R    2LGR    4J5Q    4J5R    4J5S   
CATH (Classification of proteins structures)2EEE    2L8R    2LGR    4J5Q    4J5R    4J5S   
SuperfamilyQ9Y530
Human Protein Atlas [tissue]ENSG00000124596-OARD1 [tissue]
Peptide AtlasQ9Y530
HPRD12849
IPIIPI00184871   IPI00807626   IPI00945291   IPI00945573   IPI00946297   IPI00944939   IPI00946795   IPI00945759   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y530
IntAct (EBI)Q9Y530
FunCoupENSG00000124596
BioGRIDOARD1
STRING (EMBL)OARD1
ZODIACOARD1
Ontologies - Pathways
QuickGOQ9Y530
Ontology : AmiGOpurine nucleoside binding  protein binding  deacetylase activity  purine nucleoside metabolic process  
Ontology : EGO-EBIpurine nucleoside binding  protein binding  deacetylase activity  purine nucleoside metabolic process  
NDEx NetworkOARD1
Atlas of Cancer Signalling NetworkOARD1
Wikipedia pathwaysOARD1
Orthology - Evolution
OrthoDB221443
GeneTree (enSembl)ENSG00000124596
Phylogenetic Trees/Animal Genes : TreeFamOARD1
HOVERGENQ9Y530
HOGENOMQ9Y530
Homologs : HomoloGeneOARD1
Homology/Alignments : Family Browser (UCSC)OARD1
Gene fusions - Rearrangements
Fusion : QuiverOARD1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOARD1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OARD1
dbVarOARD1
ClinVarOARD1
1000_GenomesOARD1 
Exome Variant ServerOARD1
ExAC (Exome Aggregation Consortium)ENSG00000124596
GNOMAD BrowserENSG00000124596
Genetic variants : HAPMAP221443
Genomic Variants (DGV)OARD1 [DGVbeta]
DECIPHEROARD1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOARD1 
Mutations
ICGC Data PortalOARD1 
TCGA Data PortalOARD1 
Broad Tumor PortalOARD1
OASIS PortalOARD1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDOARD1
BioMutasearch OARD1
DgiDB (Drug Gene Interaction Database)OARD1
DoCM (Curated mutations)OARD1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OARD1 (select a term)
intoGenOARD1
Cancer3DOARD1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614393   
Orphanet
DisGeNETOARD1
MedgenOARD1
Genetic Testing Registry OARD1
NextProtQ9Y530 [Medical]
TSGene221443
GENETestsOARD1
Target ValidationOARD1
Huge Navigator OARD1 [HugePedia]
snp3D : Map Gene to Disease221443
BioCentury BCIQOARD1
ClinGenOARD1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD221443
Chemical/Pharm GKB GenePA134879529
Clinical trialOARD1
Miscellaneous
canSAR (ICR)OARD1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOARD1
EVEXOARD1
GoPubMedOARD1
iHOPOARD1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Feb 23 18:45:12 CET 2018

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