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OAZ2 (ornithine decarboxylase antizyme 2)

Identity

Other aliasAZ2
HGNC (Hugo) OAZ2
LocusID (NCBI) 4947
Atlas_Id 56100
Location 15q22.31  [Link to chromosome band 15q22]
Location_base_pair Starts at 64687574 and ends at 64703281 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
LOC100499227 () / OAZ2 (15q22.31)OAZ2 (15q22.31) / LOC100499227 ()OAZ2 (15q22.31) / OAZ2 (15q22.31)
OAZ2 (15q22.31) / SMARCC1 (3p21.31)RBPMS2 (15q22.31) / OAZ2 (15q22.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OAZ2   8096
Cards
Entrez_Gene (NCBI)OAZ2  4947  ornithine decarboxylase antizyme 2
AliasesAZ2
GeneCards (Weizmann)OAZ2
Ensembl hg19 (Hinxton)ENSG00000180304 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180304 [Gene_View]  chr15:64687574-64703281 [Contig_View]  OAZ2 [Vega]
ICGC DataPortalENSG00000180304
TCGA cBioPortalOAZ2
AceView (NCBI)OAZ2
Genatlas (Paris)OAZ2
WikiGenes4947
SOURCE (Princeton)OAZ2
Genetics Home Reference (NIH)OAZ2
Genomic and cartography
GoldenPath hg38 (UCSC)OAZ2  -     chr15:64687574-64703281 -  15q22.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OAZ2  -     15q22.31   [Description]    (hg19-Feb_2009)
EnsemblOAZ2 - 15q22.31 [CytoView hg19]  OAZ2 - 15q22.31 [CytoView hg38]
Mapping of homologs : NCBIOAZ2 [Mapview hg19]  OAZ2 [Mapview hg38]
OMIM604152   
Gene and transcription
Genbank (Entrez)AF057297 AF242520 AF242521 BC035493 BC047755
RefSeq transcript (Entrez)NM_001301302 NM_002537
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OAZ2
Cluster EST : UnigeneHs.744924 [ NCBI ]
CGAP (NCI)Hs.744924
Alternative Splicing GalleryENSG00000180304
Gene ExpressionOAZ2 [ NCBI-GEO ]   OAZ2 [ EBI - ARRAY_EXPRESS ]   OAZ2 [ SEEK ]   OAZ2 [ MEM ]
Gene Expression Viewer (FireBrowse)OAZ2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4947
GTEX Portal (Tissue expression)OAZ2
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95190   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95190  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95190
Splice isoforms : SwissVarO95190
PhosPhoSitePlusO95190
Domaine pattern : Prosite (Expaxy)ODC_AZ (PS01337)   
Domains : Interpro (EBI)Acyl_CoA_acyltransferase    ODC-AZ_2    ODC_AZ   
Domain families : Pfam (Sanger)ODC_AZ (PF02100)   
Domain families : Pfam (NCBI)pfam02100   
Conserved Domain (NCBI)OAZ2
DMDM Disease mutations4947
Blocks (Seattle)OAZ2
SuperfamilyO95190
Human Protein AtlasENSG00000180304
Peptide AtlasO95190
HPRD11966
IPIIPI00028937   IPI01012135   
Protein Interaction databases
DIP (DOE-UCLA)O95190
IntAct (EBI)O95190
FunCoupENSG00000180304
BioGRIDOAZ2
STRING (EMBL)OAZ2
ZODIACOAZ2
Ontologies - Pathways
QuickGOO95190
Ontology : AmiGOprotein binding  nucleus  cytoplasm  cytosol  regulation of cellular amino acid metabolic process  polyamine metabolic process  polyamine biosynthetic process  ornithine decarboxylase inhibitor activity  negative regulation of catalytic activity  positive regulation of protein catabolic process  positive regulation of protein catabolic process  positive regulation of intracellular protein transport  negative regulation of polyamine transmembrane transport  
Ontology : EGO-EBIprotein binding  nucleus  cytoplasm  cytosol  regulation of cellular amino acid metabolic process  polyamine metabolic process  polyamine biosynthetic process  ornithine decarboxylase inhibitor activity  negative regulation of catalytic activity  positive regulation of protein catabolic process  positive regulation of protein catabolic process  positive regulation of intracellular protein transport  negative regulation of polyamine transmembrane transport  
NDEx NetworkOAZ2
Atlas of Cancer Signalling NetworkOAZ2
Wikipedia pathwaysOAZ2
Orthology - Evolution
OrthoDB4947
GeneTree (enSembl)ENSG00000180304
Phylogenetic Trees/Animal Genes : TreeFamOAZ2
HOVERGENO95190
HOGENOMO95190
Homologs : HomoloGeneOAZ2
Homology/Alignments : Family Browser (UCSC)OAZ2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOAZ2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OAZ2
dbVarOAZ2
ClinVarOAZ2
1000_GenomesOAZ2 
Exome Variant ServerOAZ2
ExAC (Exome Aggregation Consortium)OAZ2 (select the gene name)
Genetic variants : HAPMAP4947
Genomic Variants (DGV)OAZ2 [DGVbeta]
DECIPHEROAZ2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOAZ2 
Mutations
ICGC Data PortalOAZ2 
TCGA Data PortalOAZ2 
Broad Tumor PortalOAZ2
OASIS PortalOAZ2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOAZ2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOAZ2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OAZ2
DgiDB (Drug Gene Interaction Database)OAZ2
DoCM (Curated mutations)OAZ2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OAZ2 (select a term)
intoGenOAZ2
Cancer3DOAZ2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604152   
Orphanet
MedgenOAZ2
Genetic Testing Registry OAZ2
NextProtO95190 [Medical]
TSGene4947
GENETestsOAZ2
Target ValidationOAZ2
Huge Navigator OAZ2 [HugePedia]
snp3D : Map Gene to Disease4947
BioCentury BCIQOAZ2
ClinGenOAZ2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4947
Chemical/Pharm GKB GenePA31885
Clinical trialOAZ2
Miscellaneous
canSAR (ICR)OAZ2 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOAZ2
EVEXOAZ2
GoPubMedOAZ2
iHOPOAZ2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:23:03 CEST 2017

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