Atlas of Genetics and Cytogenetics in Oncology and Haematology

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OBI1-AS1 (OBI1 antisense RNA 1)


Alias (NCBI)POU4F1-AS1
HGNC (Hugo) OBI1-AS1
HGNC Previous namePOU4F1-AS1
HGNC Previous namePOU4F1 antisense RNA 1
LocusID (NCBI) 100874222
Atlas_Id 72709
Location 13q22.3  [Link to chromosome band 13q22]
Location_base_pair Starts at 78054855 and ends at 78617325 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)OBI1-AS1   42700
Entrez_Gene (NCBI)OBI1-AS1    OBI1 antisense RNA 1
AliasesPOU4F1-AS1; RNF219-AS1
GeneCards (Weizmann)OBI1-AS1
Ensembl hg19 (Hinxton)ENSG00000234377 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234377 [Gene_View]  ENSG00000234377 [Sequence]  chr13:78054855-78617325 [Contig_View]  OBI1-AS1 [Vega]
ICGC DataPortalENSG00000234377
TCGA cBioPortalOBI1-AS1
AceView (NCBI)OBI1-AS1
Genatlas (Paris)OBI1-AS1
SOURCE (Princeton)OBI1-AS1
Genetics Home Reference (NIH)OBI1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)OBI1-AS1  -     chr13:78054855-78617325 +  13q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OBI1-AS1  -     13q22.3   [Description]    (hg19-Feb_2009)
GoldenPathOBI1-AS1 - 13q22.3 [CytoView hg19]  OBI1-AS1 - 13q22.3 [CytoView hg38]
Genome Data Viewer NCBIOBI1-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK095779 BX647243
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)OBI1-AS1
Gene ExpressionOBI1-AS1 [ NCBI-GEO ]   OBI1-AS1 [ EBI - ARRAY_EXPRESS ]   OBI1-AS1 [ SEEK ]   OBI1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)OBI1-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of OBI1-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100874222
GTEX Portal (Tissue expression)OBI1-AS1
Human Protein AtlasENSG00000234377-OBI1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OBI1-AS1
Human Protein Atlas [tissue]ENSG00000234377-OBI1-AS1 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:13:29 CEST 2021

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