Atlas of Genetics and Cytogenetics in Oncology and Haematology


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OCIAD1-AS1 (OCIAD1 antisense RNA 1)

Identity

Alias_namesOCIAD1 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) OCIAD1-AS1
LocusID (NCBI) 100861517
Atlas_Id 80035
Location 4p11  [Link to chromosome band 4p11]
Location_base_pair Starts at 48852009 and ends at 48860203 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)OCIAD1-AS1   40751
Cards
Entrez_Gene (NCBI)OCIAD1-AS1  100861517  OCIAD1 antisense RNA 1
Aliases
GeneCards (Weizmann)OCIAD1-AS1
Ensembl hg19 (Hinxton)ENSG00000248256 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248256 [Gene_View]  ENSG00000248256 [Sequence]  chr4:48852009-48860203 [Contig_View]  OCIAD1-AS1 [Vega]
ICGC DataPortalENSG00000248256
TCGA cBioPortalOCIAD1-AS1
AceView (NCBI)OCIAD1-AS1
Genatlas (Paris)OCIAD1-AS1
WikiGenes100861517
SOURCE (Princeton)OCIAD1-AS1
Genetics Home Reference (NIH)OCIAD1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)OCIAD1-AS1  -     chr4:48852009-48860203 -  4p11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OCIAD1-AS1  -     4p11   [Description]    (hg19-Feb_2009)
EnsemblOCIAD1-AS1 - 4p11 [CytoView hg19]  OCIAD1-AS1 - 4p11 [CytoView hg38]
Mapping of homologs : NCBIOCIAD1-AS1 [Mapview hg19]  OCIAD1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG200457 BG210351
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OCIAD1-AS1
Cluster EST : UnigeneHs.661065 [ NCBI ]
CGAP (NCI)Hs.661065
Alternative Splicing GalleryENSG00000248256
Gene ExpressionOCIAD1-AS1 [ NCBI-GEO ]   OCIAD1-AS1 [ EBI - ARRAY_EXPRESS ]   OCIAD1-AS1 [ SEEK ]   OCIAD1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)OCIAD1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100861517
GTEX Portal (Tissue expression)OCIAD1-AS1
Human Protein AtlasENSG00000248256-OCIAD1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OCIAD1-AS1
DMDM Disease mutations100861517
Blocks (Seattle)OCIAD1-AS1
Human Protein Atlas [tissue]ENSG00000248256-OCIAD1-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000248256
BioGRIDOCIAD1-AS1
STRING (EMBL)OCIAD1-AS1
ZODIACOCIAD1-AS1
Ontologies - Pathways
Huge Navigator OCIAD1-AS1 [HugePedia]
snp3D : Map Gene to Disease100861517
BioCentury BCIQOCIAD1-AS1
ClinGenOCIAD1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861517
Clinical trialOCIAD1-AS1
Miscellaneous
canSAR (ICR)OCIAD1-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOCIAD1-AS1
EVEXOCIAD1-AS1
GoPubMedOCIAD1-AS1
iHOPOCIAD1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:20:50 CEST 2018

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